Generated with ETE http://etetoolkit.org Generated with ETE http://etetoolkit.org 99 99 46 99 95 95 Lysinibacillus fusiformis ZC1 (BFZC1_22407) - BFZC1_22407 96 Lysinibacillus fusiformis ZC1 (BFZC1_11067) - BFZC1_11067 97 Sporosarcina newyorkensis 2681 (TOPB2) - HMPREF9372_1785 61 Planococcus donghaensis MPA1U2 (GPDM_13481) - GPDM_13481 Sporosarcina newyorkensis 2681 (TRAI) - HMPREF9372_1802 98 88 46 Enterococcus italicus DSM 15952 (TOPB2) - HMPREF9088_2200 91 Carnobacterium sp. AT7 (CAT7_10010) - CAT7_10010 Carnobacterium sp. 17-4 (TOPB2) - CAR_c21290 Tetragenococcus halophilus NBRC 12172 (TEH_23640) - TEH_23640 99 99 87 Staphylococcus pseudintermedius ED99 (SPSE_1802) - SPSE_1802 Tetragenococcus halophilus NBRC 12172 (TEH_23560) - TEH_23560 Enterococcus italicus DSM 15952 (2 inparalogs) TOPA2,HMPREF9088_2267 Enterococcus faecium C68 (2 inparalogs) PLG1-0019,EFXG_01398 85 Weissella koreensis KACC 15510 (WKK_00405) - WKK_00405 Oenococcus oeni PSU-1 (OEOE_0093) - OEOE_0093 Lactobacillus buchneri ATCC 11577 (TOPB) - HMPREF0497_2964 68 Lactobacillus coryniformis subsp. coryniformis KCTC 3167 (3 inparalogs) LCORCK3_010100005553,LCORCK3_010100005603,LCORCK3_010100005468... Lactobacillus antri DSM 16041 (TRAI) - HMPREF0494_0082 Paenibacillus vortex V453 (PVOR_25463) - PVOR_25463 Staphylococcus epidermidis ATCC 12228 (SE_1482) - SE1482 87 Enterococcus faecium C68 (EFXG_02521) - EFXG_02521 99 Streptococcus urinalis 2285-97 (STRUR_0870) - STRUR_0870 83 Streptococcus anginosus F0211 (HMPREF0813_02001) - HMPREF0813_02001 71 Streptococcus agalactiae NEM316 (3 inparalogs) GBS0387,GBS0387,GBS0717... Streptococcus sp. oral taxon 071 str. 73H25AP (TOPB) - HMPREF9189_0366 Streptococcus infantis X (HMPREF1124_0848) - HMPREF1124_0848 Streptococcus infantis SK970 (HMPREF9954_1838) - HMPREF9954_1838 99 Streptococcus parauberis NCFD 2020 (SPB_0385) - SPB_0385 Streptococcus macedonicus ACA-DC 198 (TOPB) - SMA_2005 Streptococcus infantarius subsp. infantarius CJ18 (SINF_1791) - Sinf_1791 92 Bacillus cereus SJ1 (BCSJ1_09363) - BCSJ1_09363 12 Paenibacillus vortex V453 (PVOR_25468) - PVOR_25468 86 Exiguobacterium sibiricum 255-15 (EXIG_0961) - Exig_0961 Exiguobacterium sp. AT1b (EAT1B_0476) - EAT1b_0476 98 Bacillus selenitireducens MLS10 (BSEL_1932) - Bsel_1932 66 98 92 Bacillus cellulosilyticus DSM 2522 (BCELL_2019) - Bcell_2019 98 Bacillus sp. NRRL B-14911 (B14911_01095) - B14911_01095 Bacillus sp. m3-13 (BM3-1_010100007546) - Bm3-1_010100007546 39 Sporosarcina newyorkensis 2681 (TOPB3) - HMPREF9372_1801 Bacillus sp. B14905 (BB14905_05338) - BB14905_05338 Lysinibacillus sphaericus C3-41 (BSPH_2434) - Bsph_2434 95 99 88 49 Bacillus megaterium QM B1551 (BMQ_1951) - BMQ_1951 97 Bacillus cytotoxicus NVH 391-98 (BCER98_1472) - Bcer98_1472 99 Bacillus weihenstephanensis KBAB4 (BCERKBAB4_1767) - BcerKBAB4_1767 47 Bacillus cereus ATCC 14579 (BC_1832) - BC1832 Bacillus anthracis str. Sterne (TOPB2) - BAS1767 Bacillus anthracis str. Ames (TOPB2) - BA_1905 Bacillus megaterium QM B1551 (BMQ_1921) - BMQ_1921 93 67 Bacillus coagulans 36D1 (BCOA_3237) - Bcoa_3237 99 Anoxybacillus flavithermus WK1 (TOPB) - Aflv_1541 37 Geobacillus thermoglucosidasius C56-YS93 (GEOTH_2188) - Geoth_2188 Geobacillus kaustophilus HTA426 (GK1815) - GK1815 Geobacillus thermodenitrificans NG80-2 (GTNG_1702) - GTNG_1702 Bacillus sp. 2_A_57_CT2 (HMPREF1013_01995) - HMPREF1013_01995 Brevibacillus laterosporus LMG 15441 (TOPA1) - BRLA_c30400 96 Bacillus halodurans C-125 (TOPB) - BH3387 Bacillus pseudofirmus OF4 (BPOF4_02020) - BpOF4_02020 91 Bacillus cereus SJ1 (BCSJ1_09358) - BCSJ1_09358 Bacillus sp. 2_A_57_CT2 (HMPREF1013_05470) - HMPREF1013_05470 92 99 Hydrogenobaculum sp. Y04AAS1 (HY04AAS1_1027) - HY04AAS1_1027 Metallosphaera sedula DSM 5348 (MSED_0839) - Msed_0839 Metallosphaera cuprina Ar-4 (MCUP_1313) - Mcup_1313 58 Desulfobacterium autotrophicum HRM2 (TOPB) - HRM2_25900 Treponema succinifaciens DSM 2489 (TRESU_1773) - Tresu_1773 68 78 83 13 86 98 97 98 89 Porphyromonas gingivalis ATCC 33277 (PGN_0221) - PGN_0221 Porphyromonas gingivalis W83 (TOPB-1) - PG0104 Porphyromonas endodontalis ATCC 35406 (POREN0001_2011) - POREN0001_2011 Porphyromonas asaccharolytica DSM 20707 (PORAS_0326) - Poras_0326 Porphyromonas uenonis 60-3 (PORUE0001_1799) - PORUE0001_1799 99 Dysgonomonas gadei ATCC BAA-286 (HMPREF9455_01790) - HMPREF9455_01790 Dysgonomonas mossii DSM 22836 (HMPREF9456_02088) - HMPREF9456_02088 82 98 Tannerella forsythia ATCC 43037 (BFO_1535) - BFO_1535 Parabacteroides distasonis ATCC 8503 (BDI_1687) - BDI_1687 Parabacteroides merdae ATCC 43184 (PARMER_02186) - PARMER_02186 87 Paludibacter propionicigenes WB4 (PALPR_1276) - Palpr_1276 80 Bacteroides coprosuis DSM 18011 (BCOP_2427) - Bcop_2427 94 96 99 Bacteroides vulgatus ATCC 8482 (BVU_1955) - BVU_1955 48 Bacteroides salanitronis DSM 18170 (BACSA_1254) - Bacsa_1254 86 Bacteroides coprocola DSM 17136 (BACCOP_03238) - BACCOP_03238 72 Bacteroides coprophilus DSM 18228 (BACCOPRO_02420) - BACCOPRO_02420 Bacteroides plebeius DSM 17135 (BACPLE_02475) - BACPLE_02475 93 99 Bacteroides fragilis NCTC 9343 (BF3590) - BF3590 Bacteroides fragilis 3_1_12 (BFAG_03861) - BFAG_03861 99 87 Bacteroides thetaiotaomicron VPI-5482 (BT_2089) - BT_2089 94 Bacteroides xylanisolvens XB1A (BXY_12140) - BXY_12140 Bacteroides ovatus ATCC 8483 (BACOVA_03290) - BACOVA_03290 92 Bacteroides caccae ATCC 43185 (BACCAC_03133) - BACCAC_03133 Bacteroides finegoldii DSM 17565 (BACFIN_06366) - BACFIN_06366 Bacteroides intestinalis DSM 17393 (BACINT_00264) - BACINT_00264 99 63 Bacteroides fluxus YIT 12057 (HMPREF9446_01145) - HMPREF9446_01145 45 Bacteroides sp. D20 (HMPREF0969_02462) - HMPREF0969_02462 Bacteroides eggerthii DSM 20697 (BACEGG_00278) - BACEGG_00278 97 Bacteroides stercoris ATCC 43183 (BACSTE_03177) - BACSTE_03177 Bacteroides clarus YIT 12056 (HMPREF9445_03095) - HMPREF9445_03095 Bacteroides helcogenes P 36-108 (BACHE_3331) - Bache_3331 99 Prevotella ruminicola 23 (TOPB) - PRU_1269 83 84 93 Prevotella buccae D17 (HMPREF0649_01600) - HMPREF0649_01600 52 Prevotella bryantii B14 (TOPB) - PBR_1618 Prevotella copri DSM 18205 (PREVCOP_05068) - PREVCOP_05068 91 Prevotella oralis ATCC 33269 (TOPB) - HMPREF0663_11269 92 76 Prevotella sp. oral taxon 317 str. F0108 (HMPREF0670_00022) - HMPREF0670_00022 Prevotella sp. oral taxon 472 str. F0295 (TOPB) - HMPREF6745_1742 Prevotella sp. oral taxon 299 str. F0039 (HMPREF0669_01905) - HMPREF0669_01905 Prevotella marshii DSM 16973 (TOPB) - HMPREF0658_0172 58 Prevotella buccalis ATCC 35310 (HMPREF0650_0894) - HMPREF0650_0894 Prevotella timonensis CRIS 5C-B1 (HMPREF9019_0209) - HMPREF9019_0209 47 99 Prevotella oulorum F0390 (HMPREF9431_02335) - HMPREF9431_02335 Prevotella oris C735 (HMPREF0665_00994) - HMPREF0665_00994 Prevotella salivae DSM 15606 (TOPB) - HMPREF9420_1014 95 99 99 Prevotella disiens FB035-09AN (HMPREF9296_1583) - HMPREF9296_1583 99 Prevotella pallens ATCC 700821 (TOPB) - HMPREF9144_1277 Prevotella nigrescens ATCC 33563 (TOPB) - HMPREF9419_0590 47 99 Prevotella bivia JCVIHMP010 (HMPREF0648_1046) - HMPREF0648_1046 Prevotella amnii CRIS 21A-A (HMPREF9018_0265) - HMPREF9018_0265 Prevotella veroralis F0319 (HMPREF0973_00199) - HMPREF0973_00199 98 Prevotella melaninogenica ATCC 25845 (HMPREF0659_A5782) - HMPREF0659_A5782 86 Prevotella multiformis DSM 16608 (TOPB) - HMPREF9141_0853 Prevotella denticola F0289 (HMPREF9137_1154) - HMPREF9137_1154 Prevotella multisaccharivorax DSM 17128 (PREMU_1308) - Premu_1308 65 Prevotella dentalis DSM 3688 (TOPB) - HMPREF9136_0315 Prevotella bergensis DSM 17361 (TOPB) - HMPREF0645_0652 16 Prevotella tannerae ATCC 51259 (GCWU000325_01360) - GCWU000325_01360 Paraprevotella xylaniphila YIT 11841 (HMPREF9442_03233) - HMPREF9442_03233 Capnocytophaga sp. oral taxon 329 str. F0087 (HMPREF9074_01301) - HMPREF9074_01301 11 91 Fluviicola taffensis DSM 16823 (FLUTA_0815) - Fluta_0815 98 Chitinophaga pinensis DSM 2588 (CPIN_1341) - Cpin_1341 Niastella koreensis GR20-10 (NIAKO_3716) - Niako_3716 82 Dyadobacter fermentans DSM 18053 (DFER_0272) - Dfer_0272 Cytophaga hutchinsonii ATCC 33406 (TOPB) - CHU_3602 95 Weeksella virosa DSM 16922 (WEEVI_0312) - Weevi_0312 Chryseobacterium gleum ATCC 35910 (TOPB) - HMPREF0204_12653 71 Odoribacter splanchnicus DSM 20712 (ODOSP_2991) - Odosp_2991 Owenweeksia hongkongensis DSM 17368 (OWEHO_2436) - Oweho_2436 96 Nematostella vectensis (V1G222712) - NEMVEDRAFT_v1g222712-PA 83 Polaribacter sp. MED152 (EXC) - MED152_01555 Polaribacter irgensii 23-P (PI23P_09475) - PI23P_09475 95 Cyclobacterium marinum DSM 745 (CYCMA_4485) - Cycma_4485 97 Cellulophaga lytica DSM 7489 (CELLY_0943) - Celly_0943 Cellulophaga algicola DSM 14237 (CELAL_3261) - Celal_3261 58 97 Flavobacteriales bacterium ALC-1 (FBALC1_08953) - FBALC1_08953 Lacinutrix sp. 5H-3-7-4 (LACAL_2529) - Lacal_2529 94 Flavobacterium johnsoniae UW101 (FJOH_2289) - Fjoh_2289 Bizionia argentinensis JUB59 (BZARG_212) - BZARG_212 Waddlia chondrophila WSU 86-1044 (TOPB) - wcw_0920 77 Methylobacter tundripaludum SV96 (METTU_3281) - Mettu_3281 Verrucomicrobiae bacterium DG1235 (VDG1235_2791) - VDG1235_2791 Bacteroides salanitronis DSM 18170 (BACSA_1053) - Bacsa_1053 21 Bacteroides fluxus YIT 12057 (HMPREF9446_03861) - HMPREF9446_03861 99 Bacteroides salanitronis DSM 18170 (BACSA_3244) - Bacsa_3244 99 Bacteroides plebeius DSM 17135 (BACPLE_01711) - BACPLE_01711 86 Bacteroides clarus YIT 12056 (HMPREF9445_01181) - HMPREF9445_01181 Bacteroides fragilis 3_1_12 (BFAG_01348) - BFAG_01348 85 Bacteroides ovatus ATCC 8483 (BACOVA_01501) - BACOVA_01501 Bacteroides caccae ATCC 43185 (BACCAC_03675) - BACCAC_03675 Bacteroides thetaiotaomicron VPI-5482 (BT_2644) - BT_2644 Bacteroides eggerthii DSM 20697 (BACEGG_00418) - BACEGG_00418 95 Bacteroides vulgatus ATCC 8482 (BVU_0709) - BVU_0709 81 Parabacteroides merdae ATCC 43184 (PARMER_01190) - PARMER_01190 Bacteroides vulgatus ATCC 8482 (BVU_1523) - BVU_1523 Bacteroides stercoris ATCC 43183 (BACSTE_03014) - BACSTE_03014 73 99 Sphingobacterium spiritivorum ATCC 33861 (TOPB3) - HMPREF0766_10361 Sphingobacterium sp. 21 (SPH21_3672) - Sph21_3672 96 Mucilaginibacter paludis DSM 18603 (MUCPA_7140) - Mucpa_7140 54 Pedobacter saltans DSM 12145 (PEDSA_3082) - Pedsa_3082 97 Pedobacter sp. BAL39 (PBAL39_01572) - PBAL39_01572 Pedobacter heparinus DSM 2366 (PHEP_2044) - Phep_2044 95 93 Bacteroides xylanisolvens XB1A (BXY_24170) - BXY_24170 Bacteroides finegoldii DSM 17565 (BACFIN_06008) - BACFIN_06008 84 81 Dysgonomonas mossii DSM 22836 (HMPREF9456_00764) - HMPREF9456_00764 Capnocytophaga sp. oral taxon 329 str. F0087 (HMPREF9074_01155) - HMPREF9074_01155 Capnocytophaga ochracea F0287 (TOPB) - HMPREF1977_0655 99 Chryseobacterium gleum ATCC 35910 (TOPB5) - HMPREF0204_14817 50 Chryseobacterium gleum ATCC 35910 (TOPB6) - HMPREF0204_15221 87 Sphingobacterium sp. 21 (SPH21_3610) - Sph21_3610 Pedobacter saltans DSM 12145 (PEDSA_1645) - Pedsa_1645 90 Flavobacterium johnsoniae UW101 (FJOH_3021) - Fjoh_3021 73 Leadbetterella byssophila DSM 17132 (LBYS_0184) - Lbys_0184 91 99 Sphingobacterium spiritivorum ATCC 33861 (TOPB) - HMPREF0766_12663 Chryseobacterium gleum ATCC 35910 (2 inparalogs) TOPB2,TOPB4 80 Sphingobacterium spiritivorum ATCC 33861 (TOPB2) - HMPREF0766_14170 Pedobacter saltans DSM 12145 (PEDSA_1603) - Pedsa_1603 Chryseobacterium gleum ATCC 35910 (TOPB3) - HMPREF0204_13067 89 95 96 99 Bacteroides intestinalis DSM 17393 (BACINT_03723) - BACINT_03723 99 99 Bacteroides coprocola DSM 17136 (BACCOP_00183) - BACCOP_00183 Bacteroides finegoldii DSM 17565 (BACFIN_07260) - BACFIN_07260 86 Alistipes putredinis DSM 17216 (ALIPUT_00855) - ALIPUT_00855 Capnocytophaga sp. oral taxon 329 str. F0087 (HMPREF9074_02481) - HMPREF9074_02481 97 Porphyromonas gingivalis ATCC 33277 (PGN_0582) - PGN_0582 Bacteroides fragilis NCTC 9343 (EXC) - BF1254 11 Bacteroides thetaiotaomicron VPI-5482 (BT_0105) - BT_0105 Bacteroides intestinalis DSM 17393 (BACINT_03772) - BACINT_03772 93 Bacteroides fragilis NCTC 9343 (TOP1) - BF1736 Bacteroides helcogenes P 36-108 (BACHE_0173) - Bache_0173 Paraprevotella xylaniphila YIT 11841 (HMPREF9442_02021) - HMPREF9442_02021 Bacteroides finegoldii DSM 17565 (BACFIN_07202) - BACFIN_07202 98 Bacteroides fragilis 3_1_12 (BFAG_01288) - BFAG_01288 97 Bacteroides thetaiotaomicron VPI-5482 (BT_2324) - BT_2324 Bacteroides intestinalis DSM 17393 (BACINT_04719) - BACINT_04719 98 74 Capnocytophaga sp. oral taxon 329 str. F0087 (HMPREF9074_00736) - HMPREF9074_00736 0 Bacteroides intestinalis DSM 17393 (BACINT_02089) - BACINT_02089 Alistipes shahii WAL 8301 (AL1_20310) - AL1_20310 90 Bacteroides fluxus YIT 12057 (HMPREF9446_02673) - HMPREF9446_02673 Bacteroides coprocola DSM 17136 (BACCOP_00159) - BACCOP_00159 Bacteroides plebeius DSM 17135 (BACPLE_01197) - BACPLE_01197 97 Dysgonomonas mossii DSM 22836 (HMPREF9456_03014) - HMPREF9456_03014 Dysgonomonas gadei ATCC BAA-286 (HMPREF9455_03691) - HMPREF9455_03691 93 Dysgonomonas gadei ATCC BAA-286 (HMPREF9455_00806) - HMPREF9455_00806 Dysgonomonas mossii DSM 22836 (HMPREF9456_02843) - HMPREF9456_02843 Porphyromonas endodontalis ATCC 35406 (POREN0001_1038) - POREN0001_1038 81 Prevotella buccae D17 (HMPREF0649_01019) - HMPREF0649_01019 13 Porphyromonas gingivalis ATCC 33277 (PGN_0084) - PGN_0084 40 Prevotella nigrescens ATCC 33563 (TOPB2) - HMPREF9419_1191 Porphyromonas endodontalis ATCC 35406 (POREN0001_1041) - POREN0001_1041 Bacteroides intestinalis DSM 17393 (BACINT_03413) - BACINT_03413 82 98 95 99 Prevotella marshii DSM 16973 (TOPB3) - HMPREF0658_0541 Prevotella disiens FB035-09AN (HMPREF9296_2112) - HMPREF9296_2112 11 Bacteroides salanitronis DSM 18170 (BACSA_2532) - Bacsa_2532 Paraprevotella xylaniphila YIT 11841 (HMPREF9442_01093) - HMPREF9442_01093 6 88 99 75 Bacteroides sp. D20 (HMPREF0969_01766) - HMPREF0969_01766 Prevotella buccalis ATCC 35310 (HMPREF0650_1341) - HMPREF0650_1341 90 0 0 0 0 0 0 Bacteroides coprocola DSM 17136 (BACCOP_01825) - BACCOP_01825 Bacteroides fluxus YIT 12057 (HMPREF9446_00080) - HMPREF9446_00080 Bacteroides eggerthii DSM 20697 (BACEGG_03057) - BACEGG_03057 Parabacteroides merdae ATCC 43184 (PARMER_00783) - PARMER_00783 Alistipes sp. HGB5 (HMPREF9720_2858) - HMPREF9720_2858 Bacteroides stercoris ATCC 43183 (BACSTE_01108) - BACSTE_01108 Prevotella bivia JCVIHMP010 (HMPREF0648_0998) - HMPREF0648_0998 Bacteroides plebeius DSM 17135 (BACPLE_03539) - BACPLE_03539 Bacteroides intestinalis DSM 17393 (BACINT_00820) - BACINT_00820 Paraprevotella xylaniphila YIT 11841 (HMPREF9442_02696) - HMPREF9442_02696 99 Prevotella tannerae ATCC 51259 (GCWU000325_02034) - GCWU000325_02034 Prevotella timonensis CRIS 5C-B1 (HMPREF9019_0230) - HMPREF9019_0230 73 Alistipes shahii WAL 8301 (AL1_31370) - AL1_31370 Paraprevotella xylaniphila YIT 11841 (HMPREF9442_00398) - HMPREF9442_00398 55 99 Prevotella multiformis DSM 16608 (TOPB2) - HMPREF9141_1779 Tannerella forsythia ATCC 43037 (BFO_1230) - BFO_1230 Bacteroides xylanisolvens XB1A (BXY_34000) - BXY_34000 8 Bacteroides finegoldii DSM 17565 (BACFIN_05326) - BACFIN_05326 Capnocytophaga sp. oral taxon 329 str. F0087 (HMPREF9074_00800) - HMPREF9074_00800 Bacteroides coprophilus DSM 18228 (BACCOPRO_01142) - BACCOPRO_01142 99 Capnocytophaga sp. oral taxon 329 str. F0087 (HMPREF9074_01884) - HMPREF9074_01884 29 Bacteroides intestinalis DSM 17393 (BACINT_03411) - BACINT_03411 Bacteroides coprocola DSM 17136 (BACCOP_03141) - BACCOP_03141 99 Porphyromonas uenonis 60-3 (PORUE0001_1939) - PORUE0001_1939 98 57 87 Prevotella tannerae ATCC 51259 (GCWU000325_02313) - GCWU000325_02313 81 92 73 Prevotella denticola F0289 (HMPREF9137_2164) - HMPREF9137_2164 Prevotella amnii CRIS 21A-A (HMPREF9018_1804) - HMPREF9018_1804 Prevotella nigrescens ATCC 33563 (TOPB3) - HMPREF9419_1897 62 32 Prevotella amnii CRIS 21A-A (HMPREF9018_0638) - HMPREF9018_0638 99 99 Prevotella bergensis DSM 17361 (TOPB2) - HMPREF0645_1169 89 34 Prevotella timonensis CRIS 5C-B1 (HMPREF9019_1048) - HMPREF9019_1048 93 Prevotella buccalis ATCC 35310 (HMPREF0650_2365) - HMPREF0650_2365 0 Prevotella bivia JCVIHMP010 (HMPREF0648_1585) - HMPREF0648_1585 Prevotella marshii DSM 16973 (TOPB2) - HMPREF0658_0530 Prevotella oris C735 (HMPREF0665_02600) - HMPREF0665_02600 90 Prevotella tannerae ATCC 51259 (GCWU000325_01644) - GCWU000325_01644 88 Prevotella oris C735 (HMPREF0665_01312) - HMPREF0665_01312 Prevotella sp. oral taxon 317 str. F0108 (HMPREF0670_00564) - HMPREF0670_00564 Prevotella denticola F0289 (HMPREF9137_1621) - HMPREF9137_1621 Porphyromonas endodontalis ATCC 35406 (POREN0001_1891) - POREN0001_1891 88 98 96 Prevotella tannerae ATCC 51259 (GCWU000325_01759) - GCWU000325_01759 Prevotella buccae D17 (HMPREF0649_02294) - HMPREF0649_02294 Prevotella nigrescens ATCC 33563 (TOPB4) - HMPREF9419_2129 94 23 Prevotella veroralis F0319 (HMPREF0973_02999) - HMPREF0973_02999 98 Prevotella amnii CRIS 21A-A (HMPREF9018_1803) - HMPREF9018_1803 88 74 Prevotella pallens ATCC 700821 (TOPB2) - HMPREF9144_1434 Prevotella salivae DSM 15606 (TOPB2) - HMPREF9420_2384 Prevotella buccae D17 (HMPREF0649_01798) - HMPREF0649_01798 90 93 36 Prevotella sp. oral taxon 299 str. F0039 (HMPREF0669_01809) - HMPREF0669_01809 95 75 Prevotella melaninogenica ATCC 25845 (HMPREF0659_A7062) - HMPREF0659_A7062 Prevotella tannerae ATCC 51259 (GCWU000325_02568) - GCWU000325_02568 Prevotella oulorum F0390 (HMPREF9431_01884) - HMPREF9431_01884 Prevotella sp. oral taxon 299 str. F0039 (HMPREF0669_01351) - HMPREF0669_01351 Prevotella sp. oral taxon 472 str. F0295 (TOPB2) - HMPREF6745_2883 73 Prevotella disiens FB035-09AN (HMPREF9296_1258) - HMPREF9296_1258 83 61 Prevotella disiens FB035-09AN (HMPREF9296_0866) - HMPREF9296_0866 Prevotella bergensis DSM 17361 (TOPB3) - HMPREF0645_1230 Prevotella disiens FB035-09AN (HMPREF9296_0865) - HMPREF9296_0865 Prevotella nigrescens ATCC 33563 (TOPB5) - HMPREF9419_2396 36 Porphyromonas uenonis 60-3 (PORUE0001_1681) - PORUE0001_1681 76 Prevotella amnii CRIS 21A-A (2 inparalogs) HMPREF9018_0342,HMPREF9018_1165 Prevotella bivia JCVIHMP010 (HMPREF0648_0501) - HMPREF0648_0501 Porphyromonas gingivalis W83 (TOPB-2) - PG1495 90 98 Clostridium sp. HGF2 (HMPREF9406_1041) - HMPREF9406_1041 80 92 99 78 15 Enterococcus faecalis V583 (TOPB-2) - EF2312 86 Lachnospiraceae bacterium 3_1_57FAA_CT1 (HMPREF0994_00032) - HMPREF0994_00032 97 Eubacterium ventriosum ATCC 27560 (EUBVEN_00761) - EUBVEN_00761 Ruminococcus obeum A2-162 (CK5_29340) - CK5_29340 Marvinbryantia formatexigens DSM 14469 (BRYFOR_06516) - BRYFOR_06516 99 Subdoligranulum variabile DSM 15176 (SUBVAR_04455) - SUBVAR_04455 Clostridium cf. saccharolyticum K10 (CLS_04840) - CLS_04840 98 74 87 87 96 31 Roseburia hominis A2-183 (RHOM_01890) - RHOM_01890 93 Roseburia inulinivorans DSM 16841 (ROSEINA2194_02436) - ROSEINA2194_02436 Eubacterium rectale DSM 17629 (EUR_07600) - EUR_07600 Eubacterium cylindroides T2-87 (EC1_10280) - EC1_10280 Clostridium sp. D5 (HMPREF0240_02009) - HMPREF0240_02009 49 Ruminococcus torques L2-14 (RTO_00720) - RTO_00720 Eubacterium dolichum DSM 3991 (EUBDOL_00394) - EUBDOL_00394 68 76 83 Ruminococcus gnavus ATCC 29149 (RUMGNA_00749) - RUMGNA_00749 89 Subdoligranulum variabile DSM 15176 (SUBVAR_04337) - SUBVAR_04337 78 Faecalibacterium prausnitzii SL3/3 (FPR_14240) - FPR_14240 Eubacterium siraeum 70/3 (EUS_14250) - EUS_14250 84 Eubacterium dolichum DSM 3991 (EUBDOL_00098) - EUBDOL_00098 83 Clostridiales bacterium 1_7_47FAA (CBFG_04237) - CBFG_04237 95 Dorea formicigenerans ATCC 27755 (DORFOR_03198) - DORFOR_03198 Lachnospiraceae bacterium 3_1_57FAA_CT1 (HMPREF0994_05250) - HMPREF0994_05250 53 Clostridium bolteae ATCC BAA-613 (CLOBOL_04331) - CLOBOL_04331 Ruminococcaceae bacterium D16 (HMPREF0866_03173) - HMPREF0866_03173 Holdemania filiformis DSM 12042 (HOLDEFILI_02411) - HOLDEFILI_02411 Erysipelotrichaceae bacterium 3_1_53 (HMPREF0983_01760) - HMPREF0983_01760 99 Ruminococcaceae bacterium D16 (HMPREF0866_01333) - HMPREF0866_01333 99 Dorea formicigenerans ATCC 27755 (DORFOR_03210) - DORFOR_03210 Lachnospiraceae bacterium 3_1_57FAA_CT1 (HMPREF0994_05261) - HMPREF0994_05261 4 Lachnospiraceae bacterium 3_1_57FAA_CT1 (HMPREF0994_05514) - HMPREF0994_05514 Pseudoflavonifractor capillosus ATCC 29799 (BACCAP_02721) - BACCAP_02721 99 Roseburia inulinivorans DSM 16841 (ROSEINA2194_00654) - ROSEINA2194_00654 90 Ethanoligenens harbinense YUAN-3 (ETHHA_1903) - Ethha_1903 Oscillibacter valericigenes Sjm18-20 (TOPB) - OBV_