Generated with ETE http://etetoolkit.org Generated with ETE http://etetoolkit.org 65 uncultured Termite group 1 bacterium phylotype Rs-D17 (TGRD_436) - TGRD_436 99 Streptococcus mitis SK597 (SMSK597_1783) - SMSK597_1783 35 Streptococcus pneumoniae TIGR4 (SP_2162) - SpneT_02000543 0 Streptococcus pneumoniae TIGR4 (SP_2162) - SP_2162 0 Streptococcus pneumoniae R6 (SPR1968) - spr1968 Streptococcus pneumoniae D39 (SPD_1990) - SPD_1990 94 Sebaldella termitidis ATCC 33386 (STERM_2098) - Sterm_2098 Collinsella intestinalis DSM 13280 (COLINT_03023) - COLINT_03023 Collinsella stercoris DSM 13279 (COLSTE_00295) - COLSTE_00295 80 Clostridium sp. HGF2 (HMPREF9406_2421) - HMPREF9406_2421 Erysipelotrichaceae bacterium 5_2_54FAA (HMPREF0863_00503) - HMPREF0863_00503 Providencia rettgeri DSM 1131 (PROVRETT_07207) - PROVRETT_07207 Tetragenococcus halophilus NBRC 12172 (TEH_11740) - TEH_11740 Mannheimia haemolytica serotype A2 str. BOVINE (COK_0768) - COK_0768 65 Thermofilum pendens Hrk 5 (TPEN_1100) - Tpen_1100 99 99 Clostridium perfringens ATCC 13124 (CPF_2967) - CPF_2967 Clostridium perfringens NCTC 8239 (AC7_2950) - AC7_2950 94 Lactobacillus casei BL23 (LCABL_29770) - LCABL_29770 Lactobacillus rhamnosus GG (2 inparalogs) LGG_02779,LRHM_2673 Enterococcus faecalis V583 (EF_0455) - EF0455 98 Clostridium saccharolyticum WM1 (CLOSA_1210) - Closa_1210 Brachyspira intermedia PWS/A (BINT_0045) - Bint_0045 Brachyspira hyodysenteriae WA1 (BHWA1_01761) - BHWA1_01761 51 Coprobacillus sp. 29_1 (HMPREF9488_00074) - HMPREF9488_00074 Klebsiella oxytoca KCTC 1686 (KOX_16355) - KOX_16355 Aeromonas veronii B565 (B565_2118) - B565_2118 Holdemania filiformis DSM 12042 (HOLDEFILI_02532) - HOLDEFILI_02532 99 Lactobacillus farciminis KCTC 3681 (LFARK3_010100001457) - LfarK3_010100001457 86 99 92 Enterococcus gallinarum EG2 (EGBG_01906) - EGBG_01906 Enterococcus faecium C68 (EFXG_02606) - EFXG_02606 Enterococcus faecalis V583 (EF_1803) - EF1803 99 Atopobium vaginae PB189-T1-4 (HMPREF9248_0056) - HMPREF9248_0056 96 Lactobacillus animalis KCTC 3501 (LANIK3_010100007464) - LaniK3_010100007464 Haemophilus parasuis SH0165 (PTSEIIC) - HAPS_0192 Streptococcus suis 05ZYH33 (SSU05_0451) - SSU05_0451 Streptococcus peroris ATCC 700780 (HMPREF9180_1321) - HMPREF9180_1321 97 Streptococcus mitis SK321 (SMSK321_1329) - SMSK321_1329 99 98 Streptococcus pseudopneumoniae IS7493 (SPPN_00850) - SPPN_00850 Streptococcus mitis SK597 (SMSK597_0961) - SMSK597_0961 Streptococcus pneumoniae TIGR4 (SPNET_02000436) - SpneT_02000436 0 Streptococcus pneumoniae TIGR4 (SP_0062) - SP_0062 0 Streptococcus pneumoniae R6 (SPR0061) - spr0061 Streptococcus pneumoniae D39 (SPD_0067) - SPD_0067 55 Streptococcus sp. M334 (HMPREF0851_01861) - HMPREF0851_01861 0 Streptococcus mitis B6 (PTS-EIIC) - smi_0081 Streptococcus mitis NCTC 12261 (SM12261_0065) - SM12261_0065 Streptococcus sanguinis ATCC 49296 (HMPREF8578_0402) - HMPREF8578_0402 Streptococcus oralis ATCC 35037 (2 inparalogs) SMSK23_0638,HMPREF8579_0458 0 Streptococcus sp. oral taxon 071 str. 73H25AP (HMPREF9189_1800) - HMPREF9189_1800 Streptococcus sp. M143 (HMPREF0850_01573) - HMPREF0850_01573 0 0 Streptococcus infantis SK1076 (HMPREF9967_0312) - HMPREF9967_0312 Streptococcus infantis SK1302 (SIN_1970) - SIN_1970 99 99 Streptococcus mitis bv. 2 str. SK95 (HMPREF9965_0364) - HMPREF9965_0364 Streptococcus mitis bv. 2 str. F0392 (HMPREF9178_1209) - HMPREF9178_1209 99 Streptococcus infantis SK970 (HMPREF9954_2181) - HMPREF9954_2181 Streptococcus infantis X (HMPREF1124_1674) - HMPREF1124_1674 0 Streptococcus mitis ATCC 6249 (HMPREF8571_0055) - HMPREF8571_0055 Streptococcus oralis Uo5 (SOR_0058) - SOR_0058 Streptococcus gordonii str. Challis substr. CH1 (SGO_0045) - SGO_0045 93 Streptococcus sanguinis SK36 (SSA_0055) - SSA_0055 Streptococcus sp. oral taxon 056 str. F0418 (HMPREF9182_1319) - HMPREF9182_1319 97 Streptococcus cristatus ATCC 51100 (2 inparalogs) HMPREF9960_0157,HMPREF9422_1389 Streptococcus parasanguinis ATCC 903 (HMPREF8577_1554) - HMPREF8577_1554 Streptococcus australis ATCC 700641 (2 inparalogs) HMPREF9421_0370,HMPREF9961_1497 99 Streptococcus anginosus F0211 (HMPREF0813_00432) - HMPREF0813_00432 0 Streptococcus anginosus SK52 = DSM 20563 (HMPREF9966_1350) - HMPREF9966_1350 0 Streptococcus anginosus F0211 (HMPREF0813_00433) - HMPREF0813_00433 Streptococcus constellatus subsp. pharyngis SK1060 = CCUG 46377 (HMPREF1042_2473) - HMPREF1042_2473 Streptococcus parauberis NCFD 2020 (SPB_0187) - SPB_0187 98 Streptococcus uberis 0140J (SUB0044) - SUB0044 85 Streptococcus equi subsp. zooepidemicus (SEZ_0743) - SZO_12110 Streptococcus pseudoporcinus SPIN 20026 (HMPREF9320_1881) - HMPREF9320_1881 Streptococcus porcinus str. Jelinkova 176 (STRPO_0641) - STRPO_0641 Collinsella stercoris DSM 13279 (COLSTE_01907) - COLSTE_01907 Coriobacterium glomerans PW2 (CORGL_1538) - Corgl_1538 Collinsella stercoris DSM 13279 (COLSTE_00268) - COLSTE_00268 Collinsella aerofaciens ATCC 25986 (COLAER_02341) - COLAER_02341 Lactobacillus gasseri ATCC 33323 (LGAS_0118) - LGAS_0118 Lactobacillus johnsonii NCC 533 (LJ_0120) - LJ0120 Lactobacillus casei BL23 (PTS-EIIC) - LCABL_02930 Lactobacillus rhamnosus GG (2 inparalogs) LRHM_0325,LGG_00338 54 Carnobacterium sp. 17-4 (LEVF2) - CAR_c21730 Carnobacterium sp. AT7 (CAT7_10115) - CAT7_10115 Staphylococcus pseudintermedius ED99 (SPSE_1823) - SPSE_1823 Staphylococcus lugdunensis HKU09-01 (SLGD_00053) - SLGD_00053 Staphylococcus pseudintermedius ED99 (SPSE_0108) - SPSE_0108 Oenococcus oeni PSU-1 (OEOE_0380) - OEOE_0380 Pediococcus claussenii ATCC BAA-344 (PECL_35) - PECL_35 Pediococcus pentosaceus ATCC 25745 (PEPE_1758) - PEPE_1758 Pediococcus acidilactici DSM 20284 (HMPREF0623_1216) - HMPREF0623_1216 Holdemania filiformis DSM 12042 (3 inparalogs) HOLDEFILI_01563,HOLDEFILI_00952,HOLDEFILI_00645... 97 Erysipelotrichaceae bacterium 5_2_54FAA (HMPREF0863_01397) - HMPREF0863_01397 Enterococcus casseliflavus EC20 (ECBG_01358) - ECBG_01358 Enterococcus faecalis V583 (EF_0816) - EF0816 98 Lachnospiraceae bacterium 1_4_56FAA (HMPREF0988_02671) - HMPREF0988_02671 Clostridium sp. D5 (HMPREF0240_01037) - HMPREF0240_01037 97 Lactobacillus casei BL23 (LCABL_03700) - LCABL_03700 98 Lactobacillus casei BL23 (LCABL_28290) - LCABL_28290 Lactobacillus rhamnosus GG (2 inparalogs) LRHM_2548,LGG_02654 Lactobacillus johnsonii NCC 533 (LJ_0628) - LJ0628 Lactobacillus ultunensis DSM 16047 (HMPREF0548_0584) - HMPREF0548_0584 Lactobacillus jensenii 1153 (LBJG_00549) - LBJG_00549 Lactobacillus jensenii 27-2-CHN (HMPREF0525_00162) - HMPREF0525_00162 81 Enterobacter cloacae SCF1 (ENTCL_4035) - Entcl_4035 Listeria seeligeri FSL N1-067 (NT03LS_0086) - NT03LS_0086 74 Listeria monocytogenes EGD-e (LMO0023) - lmo0023 0 Listeria monocytogenes str. Scott A (BN418_0025) - LMOSA_8510 0 Listeria welshimeri serovar 6b str. SLCC5334 (LWE0026) - lwe0026 Listeria innocua Clip11262 (LIN0022) - lin0022 Enterococcus faecium C68 (EFXG_02408) - EFXG_02408 Erysipelotrichaceae bacterium 3_1_53 (HMPREF0983_00630) - HMPREF0983_00630 Clostridium butyricum E4 str. BoNT E BL5262 (CLP_3153) - CLP_3153 96 Clostridium sp. 7_2_43FAA (CSBG_03065) - CSBG_03065 Clostridium difficile 630 (XYNC) - CD3070 Enterococcus faecalis V583 (EF0078) - EF0552 75 Holdemania filiformis DSM 12042 (2 inparalogs) HOLDEFILI_00625,HOLDEFILI_00028 78 Leuconostoc kimchii IMSNU 11154 (LKI_00800) - LKI_00800 Streptococcus mitis SK597 (SMSK597_0191) - SMSK597_0191 67 Ruminococcus lactaris ATCC 29176 (RUMLAC_02444) - RUMLAC_02444 99 Dorea formicigenerans ATCC 27755 (DORFOR_02412) - DORFOR_02412 Ruminococcus torques ATCC 27756 (RUMTOR_00563) - RUMTOR_00563 99 Streptococcus vestibularis F0396 (HMPREF9192_0670) - HMPREF9192_0670 Lactobacillus ruminis SPM0211 (LRU_01902) - LRU_01902 Lactobacillus salivarius UCC118 (LSL_1715) - LSL_1715 Lactobacillus iners AB-1 (LINEA_010100002600) - LineA_010100002600 Lactobacillus gasseri ATCC 33323 (LGAS_0515) - LGAS_0515 Lactobacillus johnsonii NCC 533 (LJ_0740) - LJ0740 Streptococcus mutans UA159 (SMU_101) - SMU_101 Anaerococcus prevotii ACS-065-V-Col13 (HMPREF9290_0725) - HMPREF9290_0725 Lactobacillus casei BL23 (EF0078) - LCABL_04740 47 Clostridium sp. HGF2 (HMPREF9406_2379) - HMPREF9406_2379 Olsenella uli DSM 7084 (OLSU_1655) - Olsu_1655 Clostridium sp. HGF2 (HMPREF9406_4087) - HMPREF9406_4087 Erysipelotrichaceae bacterium 3_1_53 (HMPREF0983_04078) - HMPREF0983_04078 Fusobacterium varium ATCC 27725 (FVAG_02374) - FVAG_02374 98 Holdemania filiformis DSM 12042 (HOLDEFILI_02210) - HOLDEFILI_02210 45 Amycolatopsis mediterranei U32 (MANZ) - AMED_1369 Symbiobacterium thermophilum IAM 14863 (STH1942) - STH1942 Coprothermobacter proteolyticus DSM 5265 (COPRO5265_1497) - COPRO5265_1497 Symbiobacterium thermophilum IAM 14863 (STH1278) - STH1278 88 99 Anaerostipes caccae DSM 14662 (ANACAC_03432) - ANACAC_03432 245018 (CL2_05450) - CL2_05450 Erysipelothrix rhusiopathiae str. Fujisawa (ERH_0350) - ERH_0350 99 Collinsella intestinalis DSM 13280 (COLINT_03083) - COLINT_03083 98 Solobacterium moorei F0204 (HMPREF9430_01589) - HMPREF9430_01589 Atopobium vaginae DSM 15829 (2 inparalogs) HMPREF0091_10431,AVAGD15_010100001797 79 99 99 81 99 83 Clostridium sp. HGF2 (HMPREF9406_2213) - HMPREF9406_2213 Enterococcus faecalis V583 (EF_3030) - EF3030 Clostridium difficile 630 (CD1077) - CD1077 96 Clostridium sp. HGF2 (HMPREF9406_2677) - HMPREF9406_2677 Erysipelotrichaceae bacterium 3_1_53 (HMPREF0983_03892) - HMPREF0983_03892 Pediococcus acidilactici DSM 20284 (HMPREF0623_1552) - HMPREF0623_1552 Atopobium vaginae DSM 15829 (2 inparalogs) HMPREF0091_10551,AVAGD15_010100004657 94 Enterococcus faecalis V583 (EF_1953) - EF1953 87 Melissococcus plutonius ATCC 35311 (MPTP_0642) - MPTP_0642 Enterococcus faecium C68 (EFXG_01958) - EFXG_01958 87 Fusobacterium nucleatum subsp. nucleatum ATCC 25586 (FN0630) - FN0630 Fusobacterium varium ATCC 27725 (FVAG_00078) - FVAG_00078 Citrobacter rodentium ICC168 (AGAW) - ROD_48531 96 Citrobacter youngae ATCC 29220 (CIT292_09298) - CIT292_09298 Salmonella enterica subsp. arizonae serovar str. RSK2980 (SARI_03042) - SARI_03042 99 Salmonella bongori NCTC 12419 (SBG_3948) - SBG_3948 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (STM4537) - STM4537 Klebsiella oxytoca KCTC 1686 (KOX_10150) - KOX_10150 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (KPN_04804) - KPN_04804 87 Anaerostipes caccae DSM 14662 (ANACAC_02923) - ANACAC_02923 78 Clostridium saccharolyticum WM1 (CLOSA_1480) - Closa_1480 Clostridium sp. L2-50 (CLOL250_00423) - CLOL250_00423 Anaerococcus lactolyticus ATCC 51172 (HMPREF0072_1728) - HMPREF0072_1728 99 Listeria monocytogenes EGD-e (LMO2001) - lmo2001 Listeria monocytogenes str. Scott A (BN418_2402) - LMOSA_29160 58 Listeria innocua Clip11262 (LIN2109) - lin2109 99 Listeria welshimeri serovar 6b str. SLCC5334 (LWE2021) - lwe2021 Listeria ivanovii subsp. ivanovii PAM 55 (LIV_1982) - LIV_1982 Listeria seeligeri FSL N1-067 (NT03LS_2341) - NT03LS_2341 Pediococcus pentosaceus ATCC 25745 (PEPE_0178) - PEPE_0178 Pediococcus acidilactici DSM 20284 (HMPREF0623_1635) - HMPREF0623_1635 Erysipelotrichaceae bacterium 5_2_54FAA (HMPREF0863_02135) - HMPREF0863_02135 Eubacterium biforme DSM 3989 (EUBIFOR_00430) - EUBIFOR_00430 Clostridium beijerinckii NCIMB 8052 (CBEI_0957) - Cbei_0957 Ruminococcus lactaris ATCC 29176 (RUMLAC_00705) - RUMLAC_00705 Clostridiales bacterium 1_7_47FAA (CBFG_04852) - CBFG_04852 Clostridium sp. HGF2 (HMPREF9406_2447) - HMPREF9406_2447 Clostridium ramosum DSM 1402 (CLORAM_00206) - CLORAM_00206 73 Enterococcus gallinarum EG2 (EGBG_00532) - EGBG_00532 99 Sebaldella termitidis ATCC 33386 (STERM_3476) - Sterm_3476 Lactobacillus crispatus ST1 (MANY2) - LCRIS_01438 Lactobacillus farciminis KCTC 3681 (LFARK3_010100006731) - LfarK3_010100006731 97 Erysipelotrichaceae bacterium 3_1_53 (HMPREF0983_03628) - HMPREF0983_03628 95 Erysipelothrix rhusiopathiae str. Fujisawa (ERH_1394) - ERH_1394 Clostridium sp. HGF2 (HMPREF9406_3931) - HMPREF9406_3931 Erysipelotrichaceae bacterium 3_1_53 (HMPREF0983_03522) - HMPREF0983_03522 98 Collinsella stercoris DSM 13279 (COLSTE_00831) - COLSTE_00831 Collinsella intestinalis DSM 13280 (COLINT_02702) - COLINT_02702 78 Collinsella intestinalis DSM 13280 (COLINT_02687) - COLINT_02687 Olsenella uli DSM 7084 (OLSU_0471) - Olsu_0471 Collinsella aerofaciens ATCC 25986 (COLAER_01965) - COLAER_01965 Atopobium rimae ATCC 49626 (ATORI0001_0965) - ATORI0001_0965 Clostridium sp. HGF2 (HMPREF9406_4101) - HMPREF9406_4101 Erysipelotrichaceae bacterium 5_2_54FAA (HMPREF0863_01323) - HMPREF0863_01323 Enterococcus gallinarum EG2 (EGBG_00121) - EGBG_00121 Erysipelotrichaceae bacterium 3_1_53 (HMPREF0983_03022) - HMPREF0983_03022 Ruminococcus gnavus ATCC 29149 (RUMGNA_02800) - RUMGNA_02800 Collinsella aerofaciens ATCC 25986 (COLAER_01898) - COLAER_01898 Enterococcus faecium C68 (EFXG_02484) - EFXG_02484 86 Clostridium bolteae ATCC BAA-613 (CLOBOL_05819) - CLOBOL_05819 Clostridium saccharolyticum WM1 (CLOSA_4272) - Closa_4272 Collinsella intestinalis DSM 13280 (COLINT_03239) - COLINT_03239 Ruminococcus torques L2-14 (RTO_13770) - RTO_13770 69 98 Eubacterium cylindroides T2-87 (EC1_20920) - EC1_20920 Holdemania filiformis DSM 12042 (HOLDEFILI_00805) - HOLDEFILI_00805 Holdemania filiformis DSM 12042 (HOLDEFILI_02287) - HOLDEFILI_02287 Erysipelotrichaceae bacterium 3_1_53 (HMPREF0983_03938) - HMPREF0983_03938 Erysipelotrichaceae bacterium 5_2_54FAA (HMPREF0863_00581) - HMPREF0863_00581 95 88 Enterococcus faecium C68 (EFXG_01021) - EFXG_01021 66 Ruminococcus torques L2-14 (RTO_14350) - RTO_14350 Ruminococcus gnavus ATCC 29149 (RUMGNA_01535) - RUMGNA_01535 Bacillus coagulans 36D1 (BCOA_1654) - Bcoa_1654 Aerococcus urinae ACS-120-V-Col10a (HMPREF9243_0710) - HMPREF9243_0710 Lactobacillus farciminis KCTC 3681 (LFARK3_010100000795) - LfarK3_010100000795 98 Clostridiales bacterium 1_7_47FAA (CBFG_01063) - CBFG_01063 Ruminococcus sp. SR1/5 (CK1_13610) - CK1_13610 19 Ruminococcus sp. SR1/5 (CK1_13600) - CK1_13600 Blautia hydrogenotrophica DSM 10507 (RUMHYD_03004) - RUMHYD_03004 Holdemania filiformis DSM 12042 (HOLDEFILI_01266) - HOLDEFILI_01266 94 Lactobacillus farciminis KCTC 3681 (LFARK3_010100004387) - LfarK3_010100004387 Clostridium sp. HGF2 (HMPREF9406_3667) - HMPREF9406_3667 Coprobacillus sp. 29_1 (HMPREF9488_01653) - HMPREF9488_01653 97 Lactobacillus iners AB-1 (LINEA_010100004432) - LineA_010100004432 Lactobacillus kefiranofaciens ZW3 (WANG_1555) - WANG_1555 Aerococcus urinae ACS-120-V-Col10a (HMPREF9243_2038) - HMPREF9243_2038 99 Streptococcus urinalis 2285-97 (STRUR_0641) - STRUR_0641 Streptococcus ictaluri 707-05 (STRIC_1020) - STRIC_1020 99 88 Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957 (SDD27957_06130) - SDD27957_06130 Streptococcus equi subsp. zooepidemicus (SZO_07880) - SZO_07880 Streptococcus pyogenes M1 GAS (PTSC) - SPy_1059 Streptococcus agalactiae NEM316 (GBS1937) - gbs1937 77 Clostridium botulinum D str. 1873 (CLG_B1326) - CLG_B1326 Clostridium botulinum BKT015925 (CBC4_0945) - CbC4_0945 Clostridium perfringens NCTC 8239 (AC7_1716) - AC7_1716 Clostridium perfringens ATCC 13124 (CPF_1715) - CPF_1715 Enterococcus faecalis V583 (EF_3212) - EF3212 Tetragenococcus halophilus NBRC 12172 (TEH_12110) - TEH_12110 Holdemania filiformis DSM 12042 (HOLDEFILI_00575) - HOLDEFILI_00575 Faecalibacterium prausnitzii A2-165 (FAEPRAA2165_03526) - FAEPRAA2165_03526 98 Faecalibacterium prausnitzii A2-165 (FAEPRAA2165_01768) - FAEPRAA2165_01768 Holdemania filiformis DSM 12042 (HOLDEFILI_03873) - HOLDEFILI_03873 Holdemania filiformis DSM 12042 (2 inparalogs) HOLDEFILI_00203,HOLDEFILI_00284 Holdemania filiformis DSM 12042 (2 inparalogs) HOLDEFILI_03152,HOLDEFILI_03159 99 Coriobacterium glomerans PW2 (CORGL_1679) - Corgl_1679 Pectobacterium carotovorum subsp. carotovorum PC1 (PC1_3950) - PC1_3950 Citrobacter rodentium ICC168 (ROD_38601) - ROD_38601 88 Holdemania filiformis DSM 12042 (HOLDEFILI_00682) - HOLDEFILI_00682 Clostridiales bacterium 1_7_47FAA (CBFG_04309) - CBFG_04309 Clostridium sp. HGF2 (HMPREF9406_4186) - HMPREF9406_4186 99 Holdemania filiformis DSM 12042 (HOLDEFILI_00414) - HOLDEFILI_00414 99 Eubacterium biforme DSM 3989 (EUBIFOR_00423) - EUBIFOR_00423 Collinsella stercoris DSM 13279 (COLSTE_02472) - COLSTE_02472 Coriobacterium glomerans PW2 (CORGL_1712) - Corgl_1712 99 Holdemania filiformis DSM 12042 (HOLDEFILI_04190) - HOLDEFILI_04190 84 Clostridiales bacterium 1_7_47FAA (CBFG_04868) - CBFG_04868 Coriobacterium glomerans PW2 (CORGL_1283) - Corgl_1283 Holdemania filiformis DSM 12042 (HOLDEFILI_00695) - HOLDEFILI_00695 Holdemania filiformis DSM 12042 (HOLDEFILI_00708) - HOLDEFILI_00708 Collinsella stercoris DSM 13279 (COLSTE_02045) - COLSTE_02045 67 Bacillus clausii KSM-K16 (LEVF) - ABC4072 40 Enterococcus gallinarum EG2 (EGBG_00074) - EGBG_00074 Anaerococcus lactolyticus ATCC 51172 (HMPREF0072_1603) - HMPREF0072_1603 96 Bacillus coagulans 36D1 (BCOA_0825) - Bcoa_0825 Clostridium beijerinckii NCIMB 8052 (CBEI_0965) - Cbei_0965 Clostridium difficile 630 (CD3277) - CD3277 Eubacterium biforme DSM 3989 (EUBIFOR_02157) - EUBIFOR_02157 Eubacterium cylindroides T2-87 (EC1_00880) - EC1_00880 82 99 Enterococcus faecium C68 (EFXG_02473) - EFXG_02473 Tetragenococcus halophilus NBRC 12172 (TEH_20750) - TEH_20750 97 Clostridium beijerinckii NCIMB 8052 (CBEI_4558) - Cbei_4558 Collinsella aerofaciens ATCC 25986 (COLAER_01199) - COLAER_01199 Faecalibacterium prausnitzii L2-6 (FP2_19670) - FP2_19670 97 Lactobacillus farciminis KCTC 3681 (LFARK3_010100000820) - LfarK3_010100000820 Pediococcus acidilactici DSM 20284 (LEVF) - HMPREF0623_1483 Pediococcus pentosaceus ATCC 25745 (PEPE_0197) - PEPE_0197 Coprobacillus sp. 29_1 (HMPREF9488_00143) - HMPREF9488_00143 Clostridium saccharolyticum WM1 (CLOSA_4181) - Closa_4181 98 Holdemania filiformis DSM 12042 (HOLDEFILI_00336) - HOLDEFILI_00336 Clostridium beijerinckii NCIMB 8052 (CBEI_2901) - Cbei_2901 Clostridium saccharolyticum WM1 (CLOSA_0204) - Closa_0204 95 57 Listeria welshimeri serovar 6b str. SLCC5334 (LWE0741) - lwe0741 80 Listeria monocytogenes EGD-e (LMO0782) - lmo0782 Listeria innocua Clip11262 (LIN0775) - lin0775 0 Listeria monocytogenes str. Scott A (BN418_0903) - LMOSA_16680 Listeria seeligeri FSL N1-067 (NT03LS_0939) - NT03LS_0939 Listeria ivanovii subsp. ivanovii PAM 55 (LIV_0716) - LIV_0716 Cardiobacterium hominis ATCC 15826 (MANY) - HMPREF0198_1008 Actinobacillus minor 202 (AM202_03655) - AM202_03655 97 Haemophilus parasuis SH0165 (MANY) - HAPS_1731 Actinobacillus minor NM305 (AM305_00459) - AM305_00459 35 Pasteurella dagmatis ATCC 43325 (MANY) - HMPREF0621_1717 Pasteurella multocida subsp. multocida str. Pm70 (PTNC) - PM0833 Actinobacillus ureae ATCC 25976 (MANY2) - HMPREF0027_0389 Mannheimia haemolytica serotype A2 str. BOVINE (COK_1899) - COK_1899 30 Actinobacillus pleuropneumoniae serovar 1 str. 4074 (APLE02002046) - Aple02002046 0 Actinobacillus pleuropneumoniae serovar 1 str. 4074 (APPSER1_15170) - appser1_15170 Actinobacillus pleuropneumoniae serovar 5b str. L20 (PTNC) - APL_1392 93 Mannheimia succiniciproducens MBEL55E (MS0617) - MS0617 90 Haemophilus ducreyi 35000HP (MANY) - HD0767 Actinobacillus succinogenes 130Z (ASUC_0937) - Asuc_0937 Aggregatibacter actinomycetemcomitans D7S-1 (D7S_01287) - D7S_1317 99 Gallibacterium anatis UMN179 (UMN179_00757) - UMN179_00757 Haemophilus somnus 129PT (MANY) - HS_0608 95 Baumannia cicadellinicola str. Hc (Homalodisca coagulata) (BCI_0450) - BCI_0450 Candidatus Blochmannia pennsylvanicus str. BPEN (MANY) - BPEN_460 Candidatus Blochmannia floridanus (MANY) - Bfl446 Candidatus Blochmannia vafer str. BVAF (MANY) - BVAF_447 90 Pectobacterium carotovorum subsp. carotovorum PC1 (PC1_1925) - PC1_1925 Pectobacterium wasabiae WPP163 (PECWA_2218) - Pecwa_2218 Pectobacterium atrosepticum SCRI1043 (MANY) - ECA2386 79 Dickeya dadantii Ech586 (DD586_1973) - Dd586_1973 Dickeya zeae Ech1591 (DD1591_1982) - Dd1591_1982 87 Dickeya dadantii 3937 (MANY) - Dda3937_03726 Dickeya dadantii Ech703 (DD703_2022) - Dd703_2022 74 Rahnella sp. Y9602 (RAHAQ_2899) - Rahaq_2899 Rahnella aquatilis CIP 78.65 = ATCC 33071 (AEX52749.1) - Rahaq2_2923 78 Erwinia billingiae Eb661 (MANY) - EbC_24590 90 Plautia stali symbiont (PSTAS_010100006491) - Pstas_010100006491 Pantoea sp. At-9b (PAT9B_2237) - Pat9b_2237 80 Escherichia albertii TW07627 (MANY) - ESCAB7627_1986 99 Escherichia coli CFT073 (MANY) - c2224 0 Escherichia coli str. K-12 substr. W3110 (MANY) - 1736456 0 Escherichia coli ATCC 8739 (MANY) - EcolC_1814 0 Escherichia coli str. K-12 substr. MG1655 (MANY) - b1818 0 Escherichia coli 536 (MANY) - ECP_1761 0 Escherichia coli O157:H7 str. EDL933 (MANY) - Z2861 0 Escherichia coli BL21(DE3) (B21_01776) - B21_01776 0 Escherichia coli str. K-12 substr. DH10B (MANY) - ECDH10B_1956 0 Escherichia coli BL21(DE3) (MANY) - ECD_01788 Shigella flexneri 2a str. 301 (MANY) - SF1410 Cronobacter sakazakii ATCC BAA-894 (ESA_01434) - ESA_01434 0 Enterobacter cloacae EcWSU1 (MANY) - EcWSU1_02742 0 99 Enterobacter cancerogenus ATCC 35316 (ENTCAN_06523) - ENTCAN_06523 Enterobacter asburiae LF7a (ENTAS_2525) - Entas_2525 Citrobacter youngae ATCC 29220 (CIT292_06761) - CIT292_06761 0 Citrobacter rodentium ICC168 (MANY) - ROD_18561 Citrobacter sp. 30_2 (CSAG_01665) - CSAG_01665 99 Salmonella enterica subsp. arizonae serovar str. RSK2980 (SARI_01109) - SARI_01109 0 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (MANY) - STM1831 0 Salmonella bongori NCTC 12419 (MANY) - SBG_1687 0 Salmonella enterica subsp. enterica serovar Typhi str. CT18 (MANY) - STY1960 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (KPN_02334) - KPN_02334