Generated with ETE http://etetoolkit.org Generated with ETE http://etetoolkit.org 15 Methanosaeta concilii GP6 (MCON_1666) - MCON_1666 Methanosaeta thermophila PT (MTHE_1278) - Mthe_1278 Ferroglobus placidus DSM 10642 (FERP_2315) - Ferp_2315 Archaeoglobus fulgidus DSM 4304 (AF_1069) - AF1069 Ferroglobus placidus DSM 10642 (FERP_0993) - Ferp_0993 96 Spirochaeta smaragdinae DSM 11293 (SPIRS_3015) - Spirs_3015 Ruminococcus sp. 5_1_39BFAA (RSAG_00883) - RSAG_00883 Clostridium hylemonae DSM 15053 (CLOHYLEM_05908) - CLOHYLEM_05908 Clostridium scindens ATCC 35704 (CLOSCI_02907) - CLOSCI_02907 Pyramidobacter piscolens W5455 (HMPREF7215_2663) - HMPREF7215_2663 Laribacter hongkongensis HLHK9 (LHK_00848) - LHK_00848 99 Taylorella equigenitalis MCE9 (TEQUI_1289) - TEQUI_1289 Citrobacter rodentium ICC168 (ROD_15271) - ROD_15271 Serratia odorifera DSM 4582 (HMPREF0758_0455) - HMPREF0758_0455 57 Halothermothrix orenii H 168 (HORE_05410) - Hore_05410 99 Acetohalobium arabaticum DSM 5501 (ACEAR_1396) - Acear_1396 Campylobacterales bacterium GD 1 (CBGD1_1629) - CBGD1_1629 Burkholderiales bacterium 1_1_47 (HMPREF0189_01752) - HMPREF0189_01752 Anaerococcus hydrogenalis DSM 7454 (ANHYDRO_00934) - ANHYDRO_00934 Clostridium tetani E88 (CTC_00928) - CTC00928 Planctomyces maris DSM 8797 (PANF) - PM8797T_04995 Pirellula staleyi DSM 6068 (PSTA_2785) - Psta_2785 Isosphaera pallida ATCC 43644 (ISOP_1362) - Isop_1362 Clostridium sp. L2-50 (CLOL250_02200) - CLOL250_02200 Tepidanaerobacter sp. Re1 (TEPRE1_1857) - TepRe1_1857 96 Caldalkalibacillus thermarum TA2.A1 (CATHTA2_0605) - CathTA2_0605 96 Jonquetella anthropi E3_33 E1 (GCWU000246_01009) - GCWU000246_01009 Dethiobacter alkaliphilus AHT 1 (DEALDRAFT_0009) - DealDRAFT_0009 Ilyobacter polytropus DSM 2926 (ILYOP_1138) - Ilyop_1138 99 Sebaldella termitidis ATCC 33386 (STERM_2541) - Sterm_2541 Fusobacterium ulcerans ATCC 49185 (FUAG_00732) - FUAG_00732 Fusobacterium varium ATCC 27725 (FVAG_02032) - FVAG_02032 98 Fusobacterium mortiferum ATCC 9817 (FMAG_00511) - FMAG_00511 99 Fusobacterium gonidiaformans ATCC 25563 (FGAG_00152) - FGAG_00152 Streptobacillus moniliformis DSM 12112 (SMON_0552) - Smon_0552 Fusobacterium periodonticum ATCC 33693 (FUSPEROL_00180) - FUSPEROL_00180 Fusobacterium sp. 7_1 (FSDG_00271) - FSDG_00271 Fusobacterium sp. 4_1_13 (FSCG_00234) - FSCG_00234 90 Fusobacterium nucleatum subsp. nucleatum ATCC 25586 (FN0685) - FN0685 Fusobacterium nucleatum subsp. polymorphum ATCC 10953 (FNP_1340) - FNP_1340 Selenomonas flueggei ATCC 43531 (HMPREF0908_0374) - HMPREF0908_0374 Selenomonas sp. oral taxon 149 str. 67H29BP (PANF) - HMPREF9166_1737 Centipeda periodontii DSM 2778 (PANF) - HMPREF9081_0383 97 Selenomonas noxia ATCC 43541 (PANF) - HMPREF7545_0184 Selenomonas sp. oral taxon 137 str. F0430 (PANF) - HMPREF9162_0604 Selenomonas sputigena ATCC 35185 (SELSP_0684) - SELSPUOL_01844 Mitsuokella multacida DSM 20544 (MITSMUL_04221) - MITSMUL_04221 98 Phascolarctobacterium succinatutens YIT 12067 (HMPREF9443_00877) - HMPREF9443_00877 Eggerthella sp. YY7918 (EGYY_18620) - EGYY_18620 Eggerthella lenta DSM 2243 (ELEN_1901) - Elen_1901 Cryptobacterium curtum DSM 15641 (CCUR_11200) - Ccur_11200 Slackia heliotrinireducens DSM 20476 (SHEL_04650) - Shel_04650 Sutterella wadsworthensis 3_1_45B (HMPREF9464_01454) - HMPREF9464_01454 Succinatimonas hippei YIT 12066 (HMPREF9444_01953) - HMPREF9444_01953 98 Eubacterium ventriosum ATCC 27560 (PANF) - EUBVEN_02207 Coprococcus eutactus ATCC 27759 (PANF) - COPEUT_01553 Clostridium sp. SY8519 (CXIVA_18940) - CXIVA_18940 Eubacterium hallii DSM 3353 (PANF) - EUBHAL_00038 245018 (CL2_03270) - CL2_03270 Eubacterium saphenum ATCC 49989 (GCWU000322_00788) - GCWU000322_00788 Bacillus sp. 2_A_57_CT2 (HMPREF1013_04649) - HMPREF1013_04649 Aminobacterium colombiense DSM 12261 (AMICO_0084) - Amico_0084 Lawsonia intracellularis PHE/MN1-00 (PANF) - LI0599 Desulfovibrio piger ATCC 29098 (PANF) - DESPIG_00902 Bilophila wadsworthia 3_1_6 (HMPREF0179_02586) - HMPREF0179_02586 Desulfovibrio alaskensis G20 (DDE_3321) - Dde_3321 Desulfovibrio vulgaris str. Hildenborough (DVU_0088) - DVU0088 Desulfovibrio salexigens DSM 2638 (DESAL_2645) - Desal_2645 Desulfovibrio desulfuricans ND132 (DND132_1261) - DND132_1261 Anaerobaculum hydrogeniformans ATCC BAA-1850 (HMPREF1705_00070) - HMPREF1705_00070 98 99 Dethiosulfovibrio peptidovorans DSM 11002 (DPEP_0943) - Dpep_0943 Pyramidobacter piscolens W5455 (PANF) - HMPREF7215_2301 Aminomonas paucivorans DSM 12260 (APAU_0511) - Apau_0511 Desulfohalobium retbaense DSM 5692 (DRET_1379) - Dret_1379 53 Photobacterium profundum SS9 (C4023) - PBPRA3408 Grimontia hollisae CIP 101886 (VHA_000255) - VHA_000255 99 Photobacterium damselae subsp. damselae CIP 102761 (VDA_003073) - VDA_003073 Photobacterium leiognathi subsp. mandapamensis svers.1.1. (PANF) - PMSV_3838 Photobacterium angustum S14 (PANF) - VAS14_19031 Vibrio metschnikovii CIP 69.14 (VIB_002745) - VIB_002745 99 Vibrio sp. EJY3 (PANF) - VEJY3_06520 Vibrio furnissii NCTC 11218 (VFU_B01484) - vfu_B01484 Gallibacterium anatis UMN179 (UMN179_01539) - UMN179_01539 98 Haemophilus parainfluenzae T3T1 (PARA_08920) - PARA_08920 Aggregatibacter actinomycetemcomitans D7S-1 (D7S_01672) - D7S_1708 65 Aggregatibacter segnis ATCC 33393 (PANF) - HMPREF9064_0354 Aggregatibacter aphrophilus NJ8700 (PANF) - NT05HA_1484 70 Haemophilus haemolyticus M21621 (PANF) - GGC_1811 Haemophilus influenzae Rd KW20 (PANF) - HI0975 Haemophilus haemolyticus M19501 (PANF) - GG9_0573 Haemophilus pittmaniae HK 85 (PANF) - HMPREF9952_0089 99 Mannheimia succiniciproducens MBEL55E (PANF) - MS1786 Actinobacillus succinogenes 130Z (ASUC_0645) - Asuc_0645 Haemophilus somnus 129PT (PANF) - HS_0567 Pasteurella multocida subsp. multocida str. Pm70 (PANF) - PM1089 Pasteurella dagmatis ATCC 43325 (PANF) - HMPREF0621_1828 Haemophilus parasuis SH0165 (PANF) - HAPS_2075 Mannheimia haemolytica serotype A2 str. BOVINE (COK_1385) - COK_1385 Actinobacillus minor 202 (PANF) - AM202_0193 Actinobacillus minor NM305 (PANF) - AM305_08384 98 Haemophilus ducreyi 35000HP (PANF) - HD0671 Actinobacillus ureae ATCC 25976 (HMPREF0027_0613) - HMPREF0027_0613 Actinobacillus pleuropneumoniae serovar 5b str. L20 (PANF) - APL_1915 Actinobacillus pleuropneumoniae serovar 1 str. 4074 (2 inparalogs) APLE02001338,APPSER1_20430 Pectobacterium carotovorum subsp. carotovorum PC1 (PC1_0240) - PC1_0240 80 Pectobacterium atrosepticum SCRI1043 (PANF) - ECA0259 Pectobacterium wasabiae WPP163 (PECWA_0244) - Pecwa_0244 Dickeya dadantii Ech703 (DD703_3686) - Dd703_3686 Dickeya dadantii 3937 (PANF) - Dda3937_01598 Dickeya dadantii Ech586 (DD586_0256) - Dd586_0256 Dickeya zeae Ech1591 (PANF) - Dd1591_3844 61 Pantoea sp. At-9b (PAT9B_3593) - Pat9b_3593 Pantoea ananatis LMG 20103 (PANF) - PANA_3574 Pantoea sp. aB (PANABDRAFT_2131) - PanABDRAFT_2131 Pantoea vagans C9-1 (PANF) - Pvag_2833 94 Erwinia billingiae Eb661 (EBC_40810) - EbC_40810 Erwinia pyrifoliae Ep1/96 (EPC_02800) - EpC_02800 92 Erwinia amylovora CFBP1430 (PANF) - EAMY_0274 Erwinia tasmaniensis Et1/99 (ETA_02750) - ETA_02750 Cronobacter sakazakii ATCC BAA-894 (ESA_03647) - ESA_03647 Enterobacter aerogenes KCTC 2190 (PANF) - EAE_04710 91 Enterobacter cloacae SCF1 (ENTCL_0448) - Entcl_0448 Enterobacter sp. 638 (PANF) - Ent638_3696 Enterobacter asburiae LF7a (ENTAS_3949) - Entas_3949 99 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (PANF) - KPN_03667 84 Enterobacter cancerogenus ATCC 35316 (ENTCAN_09288) - ENTCAN_09288 95 Enterobacter cloacae subsp. cloacae ATCC 13047 (ECL_04643) - ECL_04643 50 Enterobacter cloacae EcWSU1 (PANF) - EcWSU1_04066 Enterobacter cloacae subsp. cloacae NCTC 9394 (ENC_35070) - ENC_35070 Citrobacter sp. 30_2 (CSAG_03053) - CSAG_03053 Citrobacter youngae ATCC 29220 (CIT292_10628) - CIT292_10628 95 Klebsiella oxytoca KCTC 1686 (PANF) - KOX_04125 99 Citrobacter koseri ATCC BAA-895 (CKO_04669) - CKO_04669 95 Citrobacter rodentium ICC168 (ROD_45561) - ROD_45561 Salmonella bongori NCTC 12419 (PANF) - SBG_2999 Salmonella enterica subsp. arizonae serovar str. RSK2980 (SARI_04250) - SARI_04250 75 Salmonella enterica subsp. enterica serovar Typhi str. CT18 (PANF) - STY3562 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (PANF) - STM3382 Escherichia albertii TW07627 (PANF) - ESCAB7627_0466 77 65 Escherichia coli CFT073 (PANF) - c4023 Escherichia coli 536 (PANF) - ECP_3351 74 0 Escherichia coli BL21(DE3) (PANF) - ECD_03116 Shigella flexneri 2a str. 301 (PANF) - SF3296 0 Escherichia coli str. K-12 substr. W3110 (PANF) - 85676049 0 Escherichia coli ATCC 8739 (PANF) - EcolC_0448 0 Escherichia coli str. K-12 substr. DH10B (PANF) - ECDH10B_3433 0 Escherichia coli BL21(DE3) (B21_03067) - B21_03067 0 Escherichia coli O157:H7 str. EDL933 (PANF) - Z4618 Escherichia coli str. K-12 substr. MG1655 (PANF) - b3258 99 Proteus penneri ATCC 35198 (PROPEN_03272) - PROPEN_03272 26 Proteus mirabilis HI4320 (PANF) - PMI3625 Proteus penneri ATCC 35198 (PROPEN_03271) - PROPEN_03271 Providencia stuartii ATCC 25827 (PROSTU_01342) - PROSTU_01342 Providencia alcalifaciens DSM 30120 (PROVALCAL_02123) - PROVALCAL_02123 94 Providencia rustigianii DSM 4541 (PROVRUST_06206) - PROVRUST_06206 Providencia rettgeri DSM 1131 (PROVRETT_06997) - PROVRETT_06997 Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 (PANF) - PAU_03711 Photorhabdus luminescens subsp. laumondii TTO1 (PANF) - plu4086 98 Xenorhabdus bovienii SS-2004 (PANF) - XBJ1_3793 Xenorhabdus nematophila ATCC 19061 (PANF) - XNC1_0797 57 Enterobacteriaceae bacterium 9_2_54FAA (HMPREF0864_03421) - HMPREF0864_03421 Edwardsiella tarda EIB202 (PANF) - ETAE_3148 Edwardsiella ictaluri 93-146 (PANF) - NT01EI_3503 Yersinia enterocolitica subsp. enterocolitica 8081 (PANF) - YE3814 Yersinia pestis CO92 (PANF) - YPO3657 Yersinia pestis KIM10 (PANF) - y0211 99 Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) (PANF) - HDEF_0818 Candidatus Regiella insecticola LSR1 (PANF) - REG_1245 99 Rahnella aquatilis CIP 78.65 = ATCC 33071 (AEX53894.1) - Rahaq2_4126 Rahnella sp. Y9602 (RAHAQ_4022) - Rahaq_4022 Serratia odorifera DSM 4582 (PANF) - HMPREF0758_1806 95 Serratia proteamaculans 568 (SPRO_4420) - Spro_4420 Serratia odorifera 4Rx13 (SOD_D03140) - SOD_d03140 94 Moritella sp. PE36 (PE36_23712) - PE36_23712 99 Shewanella pealeana ATCC 700345 (SPEA_1677) - Spea_1677 Shewanella halifaxensis HAW-EB4 (SHAL_2587) - Shal_2587 93 Shewanella woodyi ATCC 51908 (SWOO_2877) - Swoo_2877 Shewanella sediminis HAW-EB3 (SSED_1714) - Ssed_1714 Ferrimonas balearica DSM 9799 (FBAL_2547) - Fbal_2547 Desulfotalea psychrophila LSv54 (DP0460) - DP0460 26 Oceanimonas sp. GK1 (PANF) - GU3_05675 Aeromonas veronii B565 (B565_3242) - B565_3242 99 Aeromonas salmonicida subsp. salmonicida A449 (PANF) - ASA_0962 Aeromonas caviae Ae398 (ACAVA_010100016580) - AcavA_010100016580 Aeromonas hydrophila subsp. hydrophila ATCC 7966 (PANF) - AHA_3349 Lysinibacillus fusiformis ZC1 (PANF) - BFZC1_09060 Bacillus sp. B14905 (PANF) - BB14905_14145 Lysinibacillus sphaericus C3-41 (BSPH_3032) - Bsph_3032 59 Bacillus pseudofirmus OF4 (PANF) - BpOF4_18405 Geobacillus thermodenitrificans NG80-2 (GTNG_0289) - GTNG_0289 Bacillus coagulans 36D1 (BCOA_0622) - Bcoa_0622 56 Bacillus sp. 2_A_57_CT2 (HMPREF1013_04108) - HMPREF1013_04108 Bacillus sp. NRRL B-14911 (PANF) - B14911_17465 99 Planococcus donghaensis MPA1U2 (PANF) - GPDM_16286 99 Oceanobacillus iheyensis HTE831 (OB0501) - OB0501 Ornithinibacillus scapharcae TW25 (OTW25_010100016565) - OTW25_010100016565 Caldalkalibacillus thermarum TA2.A1 (CATHTA2_2760) - CathTA2_2760 63 Bacillus sp. m3-13 (BM3-1_010100003969) - Bm3-1_010100003969 Bacillus cytotoxicus NVH 391-98 (PANF) - Bcer98_2227 99 Bacillus weihenstephanensis KBAB4 (PANF) - BcerKBAB4_3255 77 Bacillus cereus ATCC 14579 (BC_3553) - BC3553 51 Bacillus cereus Rock4-18 (BCERE0024_32570) - bcere0024_32570 Bacillus anthracis str. Ames (BA_3607) - BA_3607 Bacillus anthracis str. Sterne (BA_3607) - BAS3346 Borrelia duttonii Ly (2 inparalogs) PANF_1,BDU_821 Borrelia turicatae 91E135 (BT0814) - BT0814 Borrelia hermsii DAH (BH0814) - BH0814 Borrelia valaisiana VS116 (PANF) - BVAVS116_0836 86 Borrelia afzelii PKo (2 inparalogs) AEL70031.1,PANF 99 Borrelia burgdorferi B31 (PANF) - BB_0814 Borrelia bissettii DN127 (PANF) - BbiDN127_0830 96 Borrelia spielmanii A14S (PANF) - BSPA14S_0834 Borrelia garinii PBi (PANF) - BG0839 Gemella haemolysans ATCC 10379 (PANF) - GEMHA0001_0257 97 Gemella haemolysans M341 (HMPREF0428_00531) - HMPREF0428_00531 Gemella sanguinis M325 (HMPREF0433_00076) - HMPREF0433_00076 Gemella morbillorum M424 (HMPREF0432_00488) - HMPREF0432_00488 30 84 88 Natranaerobius thermophilus JW/NM-WN-LF (NTHER_0769) - Nther_0769 90 Salinisphaera shabanensis E1L3A (SSPSH_06126) - SSPSH_06126 Chromohalobacter salexigens DSM 3043 (CSAL_0028) - Csal_0028 Clostridium saccharolyticum WM1 (CLOSA_3928) - Closa_3928 Clostridium sp. SY8519 (CXIVA_06250) - CXIVA_06250 68 Chromohalobacter salexigens DSM 3043 (CSAL_1068) - Csal_1068 Halomonas elongata DSM 2581 (HELO_3107) - HELO_3107 gamma proteobacterium NOR5-3 (NOR53_2670) - NOR53_2670 marine gamma proteobacterium HTCC2080 (PANF) - MGP2080_04815 Methylobacillus flagellatus KT (MFLA_1786) - Mfla_1786 Moritella sp. PE36 (PE36_09878) - PE36_09878 96 Vibrio caribbenthicus ATCC BAA-2122 (VIBC2010_12594) - VIBC2010_12594 Halomonas sp. TD01 (GME_05845) - GME_05845 92 Gordonia alkanivorans NBRC 16433 (GOALK_016_01260) - GOALK_016_01260 Thermosediminibacter oceani DSM 16646 (TOCE_1843) - Toce_1843 Coprococcus catus GD/7 (CC1_27060) - CC1_27060 Geobacillus thermodenitrificans NG80-2 (GTNG_2706) - GTNG_2706 Oceanimonas sp. GK1 (GU3_07690) - GU3_07690 Photobacterium damselae subsp. damselae CIP 102761 (VDA_000299) - VDA_000299 Vibrio sinaloensis DSM 21326 (VISI1226_09379) - VISI1226_09379 Photobacterium profundum SS9 (PBPRA0991) - PBPRA0991 Psychromonas sp. CNPT3 (PCNPT3_12373) - PCNPT3_12373 Clostridiales bacterium 1_7_47FAA (CBFG_00068) - CBFG_00068 Oceanobacillus iheyensis HTE831 (OB2777) - OB2777 Rhodothermus marinus DSM 4252 (RMAR_2448) - Rmar_2448 Psychroflexus torquis ATCC 700755 (P700755_03988) - P700755_03988 Marivirga tractuosa DSM 4126 (FTRAC_3633) - Ftrac_3633 Haliangium ochraceum DSM 14365 (HOCH_0478) - Hoch_0478 gamma proteobacterium NOR5-3 (NOR53_3156) - NOR53_3156 Congregibacter litoralis KT71 (KT71_05502) - KT71_05502 Oryza sativa Indica Group (BGIOSGA039491-PA) - BGIOSGA039491-PA 2.43