Generated with ETE http://etetoolkit.org Generated with ETE http://etetoolkit.org 16 Gordonia alkanivorans NBRC 16433 (GOALK_048_00780) - GOALK_048_00780 Rhodococcus jostii RHA1 (RHA1_RO00064) - RHA1_ro00064 Thermobifida fusca YX (TFU_3023) - Tfu_3023 0 90 Beutenbergia cavernae DSM 12333 (BCAV_2375) - Bcav_2375 87 Streptomyces flavogriseus ATCC 33331 (SFLA_5574) - Sfla_5574 74 Streptomyces sp. Mg1 (2 inparalogs) SSAG_00320,SSAG_01271 99 Streptomyces viridochromogenes DSM 40736 (SSQG_00424) - SSQG_00424 99 Streptomyces griseoaurantiacus M045 (SGM_3478) - SGM_3478 90 Streptomyces griseoflavus Tu4000 (SSRG_00232) - SSRG_00232 91 Streptomyces sviceus ATCC 29083 (SSEG_06345) - SSEG_06345 Streptomyces scabiei 87.22 (SCAB_10471) - SCAB_10471 Nakamurella multipartita DSM 44233 (NAMU_2438) - Namu_2438 Amycolatopsis mediterranei U32 (HEMG) - AMED_4155 Streptomyces sp. AA4 (SSMG_02590) - SSMG_02590 54 99 Truepera radiovictrix DSM 17093 (TRAD_1785) - Trad_1785 60 Sphaerobacter thermophilus DSM 20745 (STHE_2947) - Sthe_2947 Thermobaculum terrenum ATCC BAA-798 (TTER_2554) - Tter_2554 99 Rhodococcus erythropolis PR4 (RER_34270) - RER_34270 Cellvibrio gilvus ATCC 13127 (CELGI_1392) - Celgi_1392 99 Cellulomonas flavigena DSM 20109 (CFLA_2108) - Cfla_2108 Cellulomonas fimi ATCC 484 (CELF_2218) - Celf_2218 Cellulomonas flavigena DSM 20109 (CFLA_2409) - Cfla_2409 96 Cellulomonas fimi ATCC 484 (CELF_1273) - Celf_1273 Cellvibrio gilvus ATCC 13127 (CELGI_1042) - Celgi_1042 Jonesia denitrificans DSM 20603 (JDEN_0573) - Jden_0573 Sanguibacter keddieii DSM 10542 (SKED_29950) - Sked_29950 Nocardioides sp. JS614 (NOCA_2314) - Noca_2314 Arthrobacter sp. FB24 (ARTH_3245) - Arth_3245 Arthrobacter phenanthrenivorans Sphe3 (ASPHE3_21050) - Asphe3_21050 95 97 Methanosarcina mazei Go1 (MM_3140) - MM_3140 Methanosarcina acetivorans C2A (MA_2078) - MA2078 98 59 60 Rhodobacterales bacterium Y4I (RBY4I_3941) - RBY4I_3941 99 Anaerolinea thermophila UNI-1 (ANT_01010) - ANT_01010 Roseiflexus castenholzii DSM 13941 (RCAS_2492) - Rcas_2492 Roseiflexus sp. RS-1 (ROSERS_4171) - RoseRS_4171 61 Thermobaculum terrenum ATCC BAA-798 (TTER_2562) - Tter_2562 Meiothermus silvanus DSM 9946 (MESIL_0168) - Mesil_0168 Herpetosiphon aurantiacus DSM 785 (HAUR_1699) - Haur_1699 43 Methanoplanus petrolearius DSM 11571 (MPET_1918) - Mpet_1918 96 Methanoplanus petrolearius DSM 11571 (MPET_1916) - Mpet_1916 Methanoculleus marisnigri JR1 (MEMAR_1824) - Memar_1824 94 Methanosphaerula palustris E1-9c (MPAL_1685) - Mpal_1685 Methanocella paludicola SANAE (HEMG) - MCP_0914 Methanocella arvoryzae MRE50 (HEMG) - RCIX1909 Methanobacterium sp. SWAN-1 (MSWAN_0249) - MSWAN_0249 Methanobacterium sp. AL-21 (METBO_0827) - Metbo_0827 99 Thermococcus sp. AM4 (TAM4_2076) - TAM4_2076 25 Methanohalophilus mahii DSM 5219 (MMAH_1087) - Mmah_1087 99 Methanocella paludicola SANAE (MCP_0096) - MCP_0096 Methanocella arvoryzae MRE50 (RCIX307) - RCIX307 98 Methanocella arvoryzae MRE50 (LRC225) - LRC225 Methanocella paludicola SANAE (MCP_1115) - MCP_1115 96 Thermococcus barophilus MP (TERMP_01328) - TERMP_01328 Thermococcus sp. AM4 (TAM4_1101) - TAM4_1101 42 88 85 Lactococcus lactis subsp. cremoris MG1363 (LLMG_1859) - llmg_1859 Eubacterium limosum KIST612 (ELI_1758) - ELI_1758 Methanobrevibacter ruminantium M1 (MRU_0006) - mru_0006 Methanobrevibacter smithii ATCC 35061 (MSM_1262) - Msm_1262 Methanococcus vannielii SB (MEVAN_0077) - Mevan_0077 63 Natrialba magadii ATCC 43099 (NMAG_3403) - Nmag_3403 91 Haloferax volcanii DS2 (HEMG) - HVO_2669 Halorhabdus utahensis DSM 12940 (HUTA_1035) - Huta_1035 Halorhabdus tiamatea SARL4B (HLRTI_07494) - HLRTI_07494 96 Haladaptatus paucihalophilus DX253 (ZOD2009_13291) - ZOD2009_13291 Microlunatus phosphovorus NM-1 (HEMG) - MLP_22260 Arthrobacter phenanthrenivorans Sphe3 (ASPHE3_12740) - Asphe3_12740 96 Arthrobacter phenanthrenivorans Sphe3 (ASPHE3_34390) - Asphe3_34390 98 Arthrobacter chlorophenolicus A6 (ACHL_3336) - Achl_3336 Arthrobacter sp. FB24 (ARTH_3601) - Arth_3601 99 Muricauda ruestringensis DSM 13258 (MURRU_0458) - Murru_0458 96 Hoeflea phototrophica DFL-43 (HPDFL43_06797) - HPDFL43_06797 Phenylobacterium zucineum HLK1 (PHZ_C2297) - PHZ_c2297 Roseobacter sp. AzwK-3b (RAZWK3B_08104) - RAZWK3B_08104 Pelagibaca bermudensis HTCC2601 (R2601_08536) - R2601_08536 73 Truepera radiovictrix DSM 17093 (TRAD_1480) - Trad_1480 Mesorhizobium loti MAFF303099 (MLR4722) - mlr4722 99 Labrenzia alexandrii DFL-11 (SADFL11_819) - SADFL11_819 Jannaschia sp. CCS1 (JANN_0852) - Jann_0852 Octadecabacter antarcticus 238 (OA238_4646) - OA238_4646 86 Rhodopirellula baltica SH 1 (HEMG) - RB4887 Bdellovibrio bacteriovorus HD100 (BD2899) - Bd2899 96 Pseudovibrio sp. FO-BEG1 (HEMG) - PSE_4407 99 24 99 Shewanella loihica PV-4 (SHEW_0025) - Shew_0025 80 Shewanella woodyi ATCC 51908 (SWOO_0027) - Swoo_0027 99 Shewanella benthica KT99 (KT99_03332) - KT99_03332 Shewanella sediminis HAW-EB3 (SSED_0029) - Ssed_0029 Shewanella amazonensis SB2B (SAMA_0038) - Sama_0038 23 Shewanella frigidimarina NCIMB 400 (SFRI_0019) - Sfri_0019 92 Shewanella sp. HN-41 (SOHN41_04113) - SOHN41_04113 Shewanella oneidensis MR-1 (SO_0027) - SO_0027 Shewanella sp. ANA-3 (SHEWANA3_0030) - Shewana3_0030 77 Shewanella putrefaciens CN-32 (SPUTCN32_0019) - Sputcn32_0019 Shewanella baltica OS155 (SBAL_0027) - Sbal_0027 Shewanella halifaxensis HAW-EB4 (SHAL_0022) - Shal_0022 Shewanella pealeana ATCC 700345 (SPEA_0026) - Spea_0026 Shewanella piezotolerans WP3 (SWP_0051) - swp_0051 91 Sutterella wadsworthensis 3_1_45B (HMPREF9464_00477) - HMPREF9464_00477 87 Burkholderiales bacterium 1_1_47 (HMPREF0189_00233) - HMPREF0189_00233 Ferrimonas balearica DSM 9799 (FBAL_0018) - Fbal_0018 99 Ferrimonas balearica DSM 9799 (FBAL_1684) - Fbal_1684 Shewanella frigidimarina NCIMB 400 (SFRI_0813) - Sfri_0813 93 Shewanella benthica KT99 (KT99_20049) - KT99_20049 69 Shewanella amazonensis SB2B (SAMA_2882) - Sama_2882 98 37 Shewanella sp. HN-41 (SOHN41_00740) - SOHN41_00740 96 Shewanella baltica OS155 (SBAL_3400) - Sbal_3400 97 Shewanella putrefaciens CN-32 (SPUTCN32_3038) - Sputcn32_3038 69 Shewanella oneidensis MR-1 (SO_3720) - SO_3720 Shewanella sp. ANA-3 (SHEWANA3_0871) - Shewana3_0871 Shewanella loihica PV-4 (SHEW_0678) - Shew_0678 Shewanella piezotolerans WP3 (SWP_4046) - swp_4046 Shewanella halifaxensis HAW-EB4 (SHAL_3525) - Shal_3525 Shewanella pealeana ATCC 700345 (SPEA_0673) - Spea_0673 99 Shewanella sediminis HAW-EB3 (SSED_3790) - Ssed_3790 Shewanella woodyi ATCC 51908 (SWOO_0793) - Swoo_0793 81 Ferrimonas balearica DSM 9799 (FBAL_0016) - Fbal_0016 Shewanella frigidimarina NCIMB 400 (SFRI_0017) - Sfri_0017 99 Shewanella piezotolerans WP3 (SWP_0049) - swp_0049 Shewanella halifaxensis HAW-EB4 (SHAL_0020) - Shal_0020 Shewanella pealeana ATCC 700345 (SPEA_0022) - Spea_0022 86 Shewanella loihica PV-4 (SHEW_0023) - Shew_0023 97 87 Shewanella benthica KT99 (KT99_03342) - KT99_03342 Shewanella violacea DSS12 (SVI_0056) - SVI_0056 93 Shewanella woodyi ATCC 51908 (SWOO_0025) - Swoo_0025 Shewanella sediminis HAW-EB3 (SSED_0027) - Ssed_0027 99 Shewanella denitrificans OS217 (SDEN_0019) - Sden_0019 78 Shewanella amazonensis SB2B (SAMA_0036) - Sama_0036 Shewanella baltica OS155 (SBAL_0025) - Sbal_0025 95 Shewanella putrefaciens CN-32 (SPUTCN32_0017) - Sputcn32_0017 69 Shewanella sp. HN-41 (SOHN41_04111) - SOHN41_04111 Shewanella oneidensis MR-1 (SO_0025) - SO_0025 Shewanella sp. ANA-3 (SHEWANA3_0028) - Shewana3_0028 99 Dichelobacter nodosus VCS1703A (DNO_0458) - DNO_0458 93 Methylomonas methanica MC09 (METME_3250) - Metme_3250 93 Geobacter metallireducens GS-15 (HEMG) - Gmet_2953 Geobacter sp. FRC-32 (GEOB_0349) - Geob_0349 98 Rhodoferax ferrireducens T118 (RFER_4072) - Rfer_4072 97 Thauera sp. MZ1T (TMZ1T_0141) - Tmz1t_0141 Marinomonas posidonica IVIA-Po-181 (MAR181_2323) - Mar181_2323 Marinomonas sp. MWYL1 (MMWYL1_1487) - Mmwyl1_1487 95 Teredinibacter turnerae T7901 (HEMG) - TERTU_0857 53 Prochlorococcus marinus str. MIT 9215 (HEMG) - P9215_10111 Prochlorococcus marinus str. MIT 9515 (HEMG) - P9515_09631 99 Zunongwangia profunda SM-A87 (ZPR_1057) - ZPR_1057 Sphingobacterium spiritivorum ATCC 33861 (HMPREF0766_12962) - HMPREF0766_12962 Capnocytophaga canimorsus Cc5 (CCAN_20620) - Ccan_20620 83 Psychromonas ingrahamii 37 (PING_0198) - Ping_0198 Psychromonas sp. CNPT3 (PCNPT3_00645) - PCNPT3_00645 99 Tolumonas auensis DSM 9187 (TOLA_0022) - Tola_0022 Oceanimonas sp. GK1 (GU3_01830) - GU3_01830 Aeromonas caviae Ae398 (ACAVA_010100000976) - AcavA_010100000976 89 Aeromonas hydrophila subsp. hydrophila ATCC 7966 (AHA_0144) - AHA_0144 74 Aeromonas veronii B565 (B565_3929) - B565_3929 Aeromonas salmonicida subsp. salmonicida A449 (HEMG) - ASA_4245 Grimontia hollisae CIP 101886 (VHA_000123) - VHA_000123 99 99 Vibrio metschnikovii CIP 69.14 (VIB_002996) - VIB_002996 69 Vibrio furnissii NCTC 11218 (VFU_A00361) - vfu_A00361 Vibrio cholerae O395 (ACP08227.1) - VC395_0200 0 Vibrio cholerae O1 biovar El Tor str. N16961 (VC_2755) - VC2755 Vibrio cholerae O395 (HEMG) - VC0395_A2537 98 Vibrio mimicus MB451 (VII_003563) - VII_003563 Vibrio sp. RC586 (VOA_000076) - VOA_000076 88 Vibrio shilonii AK1 (HEMG) - VSAK1_12717 96 Vibrio caribbenthicus ATCC BAA-2122 (HEMG) - VIBC2010_13426 31 Vibrio tubiashii ATCC 19109 (HEMG) - VITU9109_19869 Vibrio brasiliensis LMG 20546 (HEMG) - VIBR0546_08284 96 98 Vibrio anguillarum 775 (VAA_00815) - VAA_00815 Vibrionales bacterium SWAT-3 (HEMG) - VSWAT3_11593 Vibrio splendidus LGP32 (VS_0044) - VS_0044 Vibrio orientalis CIP 102891 = ATCC 33934 (HEMG) - VIA_000689 69 87 99 70 Vibrio coralliilyticus ATCC BAA-450 (VIC_000322) - VIC_000322 Vibrio sp. EJY3 (HEMG) - VEJY3_00155 Vibrio parahaemolyticus RIMD 2210633 (VP0033) - VP0033 78 Vibrio alginolyticus 40B (HEMG) - VMC_08100 Vibrio harveyi ATCC BAA-1116 (HEMG) - VIBHAR_00463 Vibrio sp. N418 (HEMG) - VIBRN418_12761 Photobacterium angustum S14 (VAS14_22282) - VAS14_22282 Photobacterium leiognathi subsp. mandapamensis svers.1.1. (HEMG) - PMSV_3307 Photobacterium profundum SS9 (STY3573) - PBPRA0067 Vibrio fischeri ES114 (HEMG) - VF_0028 Aliivibrio salmonicida LFI1238 (HEMG) - VSAL_I2977 99 Vibrio vulnificus CMCP6 (VV1_0978) - VV1_0978 Vibrio sinaloensis DSM 21326 (HEMG) - VISI1226_16880 74 99 98 Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis (HEMG) - WGLp123 Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) (HEMG) - WIGMOR_0133 98 99 36 Mannheimia succiniciproducens MBEL55E (HEMG) - MS0176 75 93 Haemophilus somnus 129PT (HS_1569) - HS_1569 Pasteurella multocida subsp. multocida str. Pm70 (PM1499) - PM1499 Pasteurella dagmatis ATCC 43325 (HEMG) - HMPREF0621_0932 71 Reinekea blandensis MED297 (MED297_17153) - MED297_17153 44 Haemophilus pittmaniae HK 85 (HEMG) - HMPREF9952_0548 Haemophilus parainfluenzae T3T1 (FLDA) - PARA_04470 76 Actinobacillus succinogenes 130Z (ASUC_0513) - Asuc_0513 Aggregatibacter aphrophilus NJ8700 (HEMG) - NT05HA_1750 83 Aggregatibacter segnis ATCC 33393 (HEMG) - HMPREF9064_1706 Aggregatibacter actinomycetemcomitans D7S-1 (D7S_00764) - D7S_0780 Gallibacterium anatis UMN179 (UMN179_01330) - UMN179_01330 Haemophilus parasuis SH0165 (HEMG) - HAPS_1976 Actinobacillus minor 202 (AM202_04177) - AM202_04177 Actinobacillus minor NM305 (AM305_04518) - AM305_04518 96 Mannheimia haemolytica serotype A2 str. BOVINE (COK_2284) - COK_2284 Actinobacillus ureae ATCC 25976 (HEMG) - HMPREF0027_0075 Actinobacillus pleuropneumoniae serovar 1 str. 4074 (APPSER1_17100) - appser1_17100 0 Actinobacillus pleuropneumoniae serovar 1 str. 4074 (APLE02000049) - Aple02000049 Actinobacillus pleuropneumoniae serovar 5b str. L20 (APL_1591) - APL_1591 95 Yersinia enterocolitica subsp. enterocolitica 8081 (HEMG) - YE0273 Yersinia pestis CO92 (HEMG) - YPO3761 Yersinia pestis KIM10 (HEMG) - y0469 91 Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) (HEMG) - HDEF_1765 Candidatus Regiella insecticola LSR1 (HEMG) - REG_0341 87 Sodalis glossinidius str. morsitans (SG0121) - SG0121 Enterobacteriaceae bacterium 9_2_54FAA (HMPREF0864_04076) - HMPREF0864_04076 Edwardsiella tarda EIB202 (HEMG) - ETAE_0162 Edwardsiella ictaluri 93-146 (HEMG) - NT01EI_0155 99 99 Rahnella sp. Y9602 (RAHAQ_4145) - Rahaq_4145 Rahnella aquatilis CIP 78.65 = ATCC 33071 (AEX54016.1) - Rahaq2_4263 Serratia odorifera DSM 4582 (HEMG) - HMPREF0758_1650 78 Serratia symbiotica str. Cinara cedri (HEMG) - SCc_013 96 Serratia odorifera 4Rx13 (SOD_G02690) - SOD_g02690 Serratia proteamaculans 568 (SPRO_0266) - Spro_0266 99 92 99 Enterobacter cloacae SCF1 (ENTCL_4188) - Entcl_4188 Cronobacter sakazakii ATCC BAA-894 (ESA_03710) - ESA_03710 92 Klebsiella oxytoca KCTC 1686 (HEMG) - KOX_07855 73 Enterobacter aerogenes KCTC 2190 (HEMG) - EAE_08070 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (HEMG) - KPN_04344 99 98 Enterobacter sp. 638 (HEMG) - Ent638_3945 Enterobacter asburiae LF7a (ENTAS_4228) - Entas_4228 97 Enterobacter cancerogenus ATCC 35316 (ENTCAN_09732) - ENTCAN_09732 99 Enterobacter cloacae subsp. cloacae ATCC 13047 (ECL_04947) - ECL_04947 Enterobacter cloacae EcWSU1 (HEMG) - EcWSU1_04332 Citrobacter koseri ATCC BAA-895 (CKO_00193) - CKO_00193 95 49 Citrobacter rodentium ICC168 (HEMG) - ROD_39051 Escherichia coli 536 (HEMG) - ECP_4063 96 Escherichia coli ATCC 8739 (HEMG) - EcolC_4160 0 Escherichia coli O157:H7 str. EDL933 (HEMG) - Z5372 0 Escherichia coli str. K-12 substr. W3110 (HEMG) - 85676203 0 Escherichia coli BL21(DE3) (B21_03690) - B21_03690 0 Escherichia coli str. K-12 substr. DH10B (HEMG) - ECDH10B_4039 0 Escherichia coli CFT073 (HEMG) - c4797 0 Escherichia coli str. K-12 substr. MG1655 (HEMG) - b3850 0 Shigella flexneri 2a str. 301 (HEMG) - SF3926 Escherichia coli BL21(DE3) (HEMG) - ECD_03741 Salmonella bongori NCTC 12419 (HEMG) - SBG_3518 97 Salmonella enterica subsp. arizonae serovar str. RSK2980 (SARI_03672) - SARI_03672 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (HEMG) - STM3987 Salmonella enterica subsp. enterica serovar Typhi str. CT18 (HEMG) - STY3573 Citrobacter youngae ATCC 29220 (CIT292_08806) - CIT292_08806 Citrobacter sp. 30_2 (CSAG_04685) - CSAG_04685 Pantoea sp. At-9b (PAT9B_0198) - Pat9b_0198 Plautia stali symbiont (PSTAS_010100019749) - Pstas_010100019749 Pantoea ananatis LMG 20103 (HEMG) - PANA_0205 Pantoea vagans C9-1 (HEMG) - Pvag_3446 Pantoea sp. aB (PANABDRAFT_3328) - PanABDRAFT_3328 Erwinia billingiae Eb661 (HEMG) - EbC_02480 Erwinia amylovora CFBP1430 (HEMG) - EAMY_0227 54 Erwinia tasmaniensis Et1/99 (HEMG) - ETA_02500 Erwinia pyrifoliae Ep1/96 (HEMG) - EpC_02370 Pectobacterium atrosepticum SCRI1043 (HEMG) - ECA0212 86 Pectobacterium wasabiae WPP163 (PECWA_4230) - Pecwa_4230 Pectobacterium carotovorum subsp. carotovorum PC1 (PC1_4040) - PC1_4040 32 Dickeya zeae Ech1591 (HEMG) - Dd1591_3897 Dickeya dadantii Ech586 (DD586_0204) - Dd586_0204 77 Dickeya dadantii 3937 (HEMG) - Dda3937_02081 Dickeya dadantii Ech703 (DD703_3743) - Dd703_3743 96 Leishmania braziliensis MHOM BR 75 M2904 (XP_001562059.1) - XP_001562059.1 29 Leishmania mexicana MHOM GT 2001 U1103 (XP_003872142.1) - XP_003872142.1 99 Leishmania major (LMJF.06.1280) - LmjF.06.1280 Leishmania donovani (XP_003858439.1) - XP_003858439.1 Leishmania infantum JPCM5 (XP_001463210.1) - XP_001463210.1 Xenorhabdus nematophila ATCC 19061 (HEMG) - XNC1_3871 99 Xenorhabdus bovienii SS-2004 (HEMG) - XBJ1_0522 Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 (HEMG) - PAU_03869 Photorhabdus luminescens subsp. laumondii TTO1 (HEMG) - plu4398 75 Proteus mirabilis HI4320 (HEMG) - PMI3554 Providencia stuartii ATCC 25827 (PROSTU_00654) - PROSTU_00654 Providencia rettgeri DSM 1131 (PROVRETT_07660) - PROVRETT_07660 62 Providencia rustigianii DSM 4541 (PROVRUST_07930) - PROVRUST_07930 Providencia alcalifaciens DSM 30120 (PROVALCAL_01399) - PROVALCAL_01399 Chlorobium phaeobacteroides BS1 (CPHAMN1_1410) - Cphamn1_1410 80 Truepera radiovictrix DSM 17093 (3 inparalogs) TRAD_1634,TRAD_1780,TRAD_1798... Stackebrandtia nassauensis DSM 44728 (SNAS_3662) - Snas_3662 99 Actinomyces coleocanis DSM 15436 (HMPREF0044_1235) - HMPREF0044_1235 62 Actinomyces odontolyticus ATCC 17982 (ACTODO_01640) - ACTODO_01640 Actinomyces sp. oral taxon 180 str. F0310 (HMPREF9006_0383) - HMPREF9006_0383 Actinomyces sp. oral taxon 448 str. F0400 (HMPREF9062_1412) - HMPREF9062_1412 60 Actinomyces urogenitalis DSM 15434 (HMPREF0058_1862) - HMPREF0058_1862 Actinomyces sp. oral taxon 175 str. F0384 (HMPREF9058_2618) - HMPREF9058_2618 Actinomyces sp. oral taxon 170 str. F0386 (HMPREF9056_00535) - HMPREF9056_00535 Methanocella paludicola SANAE (MCP_2895) - MCP_2895 Methanocella arvoryzae MRE50 (LRC244) - LRC244 2.53