Generated with ETE http://etetoolkit.org Generated with ETE http://etetoolkit.org 93 Candidatus Carsonella ruddii PV (CRP_110) - CRP_110 88 52 99 73 Mycoplasma pulmonis UAB CTIP (RECA) - MYPU_2520 90 Mycoplasma mobile 163K (RECA) - MMOB5150 91 98 Mycoplasma arthritidis 158L3-1 (RECA) - MARTH_orf179 Mycoplasma hominis ATCC 23114 (RECA) - MHO_1190 99 Mycoplasma hyorhinis GDL-1 (RECA) - MYM_0380 95 Mycoplasma hyopneumoniae J (RECA) - MHJ_0035 Mycoplasma conjunctivae HRC/581 (RECA) - MCJ_006600 93 82 Mycoplasma anatis 1340 (RECA) - GIG_01605 50 Mycoplasma alligatoris A21JP2 (RECA) - MALL_0314 Mycoplasma crocodyli MP145 (RECA) - MCRO_0173 Mycoplasma synoviae 53 (RECA) - MS53_0561 98 Mycoplasma fermentans PG18 (RECA) - MBIO_0827 59 Mycoplasma bovis PG45 (RECA) - MBOVPG45_0258 Mycoplasma agalactiae (RECA) - MAGa6140 Mycoplasma columbinum SF7 (RECA) - MCSF7_00321 99 Mesoplasma florum L1 (RECA) - Mfl206 99 Mycoplasma putrefaciens KS1 (RECA) - MPUT_0409 Mycoplasma leachii PG50 (RECA) - MSB_A0571 Mycoplasma mycoides subsp. mycoides SC str. PG1 (RECA) - MSC_0421 99 98 98 Fervidobacterium nodosum Rt17-B1 (RECA) - Fnod_1291 99 Thermosipho africanus TCF52B (RECA) - THA_1462 Thermosipho melanesiensis BI429 (RECA) - Tmel_1158 95 99 Thermotoga neapolitana DSM 4359 (RECA) - CTN_0794 92 Thermotoga petrophila RKU-1 (RECA) - Tpet_0938 Thermotoga maritima MSB8 (RECA) - TM1859 99 Thermotoga lettingae TMO (RECA) - Tlet_2040 Thermotoga thermarum DSM 5069 (RECA) - Theth_2004 36 Petrotoga mobilis SJ95 (RECA) - Pmob_0081 Marinitoga piezophila KA3 (RECA) - Marpi_1365 97 Kosmotoga olearia TBF 19.5.1 (RECA) - Kole_1564 Mesotoga prima MesG1.Ag.4.2 (RECA) - ThebaDRAFT_0468 90 95 68 Moorella thermoacetica ATCC 39073 (MOTH_0296) - Moth_0296 Thermovirga lienii DSM 17291 (RECA) - Tlie_0853 8 Anaerobaculum hydrogeniformans ATCC BAA-1850 (RECA) - HMPREF1705_02212 21 99 Aminomonas paucivorans DSM 12260 (RECA) - Apau_0612 Thermanaerovibrio acidaminovorans DSM 6589 (RECA) - Taci_1658 85 Aminobacterium colombiense DSM 12261 (RECA) - Amico_0394 91 Dethiosulfovibrio peptidovorans DSM 11002 (RECA) - Dpep_0550 83 Pyramidobacter piscolens W5455 (RECA) - HMPREF7215_1559 Jonquetella anthropi E3_33 E1 (RECA) - GCWU000246_00139 69 60 20 Brachyspira murdochii DSM 12563 (RECA) - Bmur_2398 Brachyspira pilosicoli 95/1000 (RECA) - BP951000_1894 Brachyspira hyodysenteriae WA1 (RECA) - BHWA1_01107 Brachyspira intermedia PWS/A (RECA) - Bint_2133 Thermodesulfobium narugense DSM 14796 (RECA) - Thena_0151 90 68 Lactobacillus buchneri ATCC 11577 (HMPREF0497_2318) - HMPREF0497_2318 92 Lactobacillus rhamnosus GG (2 inparalogs) LRHM_2538,LGG_02643 Lactobacillus casei BL23 (LCABL_28180) - LCABL_28180 Lactobacillus sanfranciscensis TMW 1.1304 (RECA) - LSA_01160 Lactobacillus fructivorans KCTC 3543 (LFRUK3_010100003328) - LfruK3_010100003328 79 96 98 Acholeplasma laidlawii PG-8A (RECA) - ACL_0890 99 Candidatus Phytoplasma mali (RECA) - ATP_00135 Onion yellows phytoplasma OY-M (2 inparalogs) PAM_716,PAM_717 99 97 Coprobacillus sp. 29_1 (RECA) - HMPREF9488_01732 Clostridium ramosum DSM 1402 (RECA) - CLORAM_00023 Clostridium spiroforme DSM 1552 (RECA) - CLOSPI_01396 92 Erysipelothrix rhusiopathiae str. Fujisawa (RECA) - ERH_0663 81 98 Eubacterium cylindroides T2-87 (RECA) - EC1_03490 Eubacterium biforme DSM 3989 (RECA) - EUBIFOR_00460 48 Eubacterium dolichum DSM 3991 (RECA) - EUBDOL_01276 36 Erysipelotrichaceae bacterium 5_2_54FAA (RECA) - HMPREF0863_01058 Clostridium sp. HGF2 (RECA) - HMPREF9406_1533 98 Holdemania filiformis DSM 12042 (RECA) - HOLDEFILI_03705 Solobacterium moorei F0204 (RECA) - HMPREF9430_00538 Bulleidia extructa W1219 (RECA) - HMPREF9013_0768 50 98 Haloplasma contractile SSD-17B (RECA) - HLPCO_11568 Turicibacter sanguinis PC909 (RECA) - CUW_2112 84 86 Macrococcus caseolyticus JCSC5402 (RECA) - MCCL_0875 98 Staphylococcus pseudintermedius ED99 (RECA) - SPSE_1493 84 54 Staphylococcus hominis subsp. hominis C80 (RECA) - HMPREF0798_00468 55 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 (RECA) - SSP1480 33 91 18 99 0 Staphylococcus aureus subsp. aureus COL (RECA) - SACOL1304 Staphylococcus aureus subsp. aureus Mu50 (RECA) - SAV1285 Staphylococcus aureus subsp. aureus NCTC 8325 (RECA) - SAOUHSC_01262 Staphylococcus aureus subsp. aureus MSHR1132 (RECA) - SAMSHR1132_11280 88 Staphylococcus caprae C87 (RECA) - HMPREF0786_00370 70 Staphylococcus epidermidis ATCC 12228 (RECA) - SE0963 Staphylococcus epidermidis RP62A (RECA) - SERP0852 Staphylococcus epidermidis M23864:W1 (RECA) - HMPREF0793_2019 Staphylococcus warneri L37603 (RECA) - STAWA0001_1934 80 Staphylococcus lugdunensis HKU09-01 (RECA) - SLGD_01609 Staphylococcus haemolyticus JCSC1435 (RECA) - SH1628 Staphylococcus carnosus subsp. carnosus TM300 (RECA) - Sca_0926 98 84 48 98 Granulicatella elegans ATCC 700633 (RECA) - HMPREF0446_00107 Granulicatella adiacens ATCC 49175 (RECA) - HMPREF0444_0153 Lactococcus garvieae Lg2 (RECA) - LCGL_0233 99 Lactococcus lactis subsp. cremoris MG1363 (RECA) - llmg_0374 Lactococcus lactis subsp. lactis Il1403 (RECA) - L0260 96 17 96 67 Streptococcus australis ATCC 700641 (2 inparalogs) RECA,HMPREF9961_1015 Streptococcus parasanguinis ATCC 903 (RECA) - HMPREF8577_1439 99 96 82 77 Streptococcus oralis Uo5 (RECA) - SOR_1705 91 Streptococcus sanguinis ATCC 49296 (RECA) - HMPREF8578_0745 93 96 Streptococcus oralis ATCC 35037 (HMPREF8579_0138) - HMPREF8579_0138 Streptococcus mitis ATCC 6249 (RECA) - HMPREF8571_0396 Streptococcus oralis ATCC 35037 (SMSK23_0590) - SMSK23_0590 88 76 Streptococcus peroris ATCC 700780 (RECA) - HMPREF9180_1391 99 Streptococcus infantis SK970 (RECA) - HMPREF9954_2099 Streptococcus infantis X (RECA) - HMPREF1124_1744 Streptococcus infantis SK1076 (RECA) - HMPREF9967_0245 79 Streptococcus sp. M143 (RECA) - HMPREF0850_01522 80 Streptococcus mitis bv. 2 str. SK95 (RECA) - HMPREF9965_0531 Streptococcus mitis bv. 2 str. F0392 (RECA) - HMPREF9178_0993 Streptococcus sp. oral taxon 071 str. 73H25AP (RECA) - HMPREF9189_1460 93 98 Streptococcus mitis SK597 (RECA) - SMSK597_0022 98 Streptococcus pseudopneumoniae IS7493 (RECA) - SPPN_09845 0 0 Streptococcus pneumoniae TIGR4 (SP_1940) - SP_1940 Streptococcus pneumoniae R6 (RECA) - spr1757 Streptococcus pneumoniae D39 (RECA) - SPD_1739 Streptococcus pneumoniae TIGR4 (RECA) - SpneT_02000001 70 Streptococcus sp. M334 (RECA) - HMPREF0851_00963 78 Streptococcus mitis B6 (RECA) - smi_1839 74 Streptococcus mitis SK321 (RECA) - SMSK321_1658 Streptococcus mitis NCTC 12261 (RECA) - SM12261_0916 97 73 Streptococcus agalactiae NEM316 (RECA) - gbs2047 96 13 Streptococcus suis 05ZYH33 (RECA) - SSU05_0064 91 Streptococcus mutans UA159 (RECA) - SMU_2085 Streptococcus macacae NCTC 11558 (RECA) - STRMA_1535 Streptococcus urinalis 2285-97 (RECA) - STRUR_0087 63 99 74 Streptococcus thermophilus LMG 18311 (RECA) - stu0060 85 Streptococcus salivarius 57.I (RECA) - Ssal_02111 Streptococcus sp. C150 (RECA) - HMPREF0848_01931 Streptococcus vestibularis F0396 (RECA) - HMPREF9192_0033 86 99 Streptococcus macedonicus ACA-DC 198 (RECA) - SMA_2112 89 Streptococcus infantarius subsp. infantarius CJ18 (RECA) - Sinf_1892 Streptococcus equinus ATCC 9812 (RECA) - HMPREF0819_1335 86 Streptococcus criceti HS-6 (RECA) - STRCR_0309 Streptococcus downei F0415 (RECA) - HMPREF9176_0995 83 87 Streptococcus ictaluri 707-05 (RECA) - STRIC_0200 78 Streptococcus equi subsp. zooepidemicus (RECA) - SZO_18640 94 Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957 (RECA) - SDD27957_10885 Streptococcus pyogenes M1 GAS (RECA) - SPy_2116 90 Streptococcus parauberis NCFD 2020 (RECA) - SPB_2129 59 Streptococcus uberis 0140J (RECA) - SUB1778 98 Streptococcus porcinus str. Jelinkova 176 (RECA) - STRPO_1325 Streptococcus pseudoporcinus SPIN 20026 (RECA) - HMPREF9320_1421 80 95 Streptococcus constellatus subsp. pharyngis SK1060 = CCUG 46377 (RECA) - HMPREF1042_2159 0 Streptococcus anginosus F0211 (RECA) - HMPREF0813_00274 Streptococcus anginosus SK52 = DSM 20563 (RECA) - HMPREF9966_1517 98 Streptococcus sanguinis SK36 (RECA) - SSA_2245 21 Streptococcus cristatus ATCC 51100 (2 inparalogs) RECA,HMPREF9960_1108 98 Streptococcus gordonii str. Challis substr. CH1 (RECA) - SGO_2045 Streptococcus sp. oral taxon 056 str. F0418 (RECA) - HMPREF9182_1159 95 72 Weissella koreensis KACC 15510 (RECA) - WKK_05850 97 Weissella cibaria KACC 11862 (WCIBK1_010100002109) - WcibK1_010100002109 Weissella paramesenteroides ATCC 33313 (RECA) - HMPREF0877_1669 Gemella sanguinis M325 (RECA) - HMPREF0433_01638 52 Gemella morbillorum M424 (RECA) - HMPREF0432_00193 91 Gemella haemolysans ATCC 10379 (RECA) - GEMHA0001_0576 Gemella haemolysans M341 (RECA) - HMPREF0428_00234 94 Oenococcus oeni PSU-1 (RECA) - OEOE_1382 99 Leuconostoc fallax KCTC 3537 (RECA) - LfalK3_010100009249 93 Leuconostoc citreum KM20 (RECA) - LCK_01264 80 96 Leuconostoc gasicomitatum LMG 18811 (RECA) - LEGAS_0648 Leuconostoc gelidum KCTC 3527 (RECA) - LgelK3_010100006531 51 Leuconostoc argentinum KCTC 3773 (RECA) - LargK3_010100008021 Leuconostoc kimchii IMSNU 11154 (RECA) - LKI_08290 37 Fructobacillus fructosus KCTC 3544 (RECA) - FfruK3_010100004375 Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 (RECA) - LEUM_0584 87 99 Eremococcus coleocola ACS-139-V-Col8 (RECA) - HMPREF9257_0960 Catonella morbi ATCC 51271 (GCWU000282_00258) - GCWU000282_00258 45 97 91 99 Melissococcus plutonius ATCC 35311 (RECA) - MPTP_0292 24 Enterococcus faecalis V583 (RECA) - EF3171 72 94 28 Enterococcus italicus DSM 15952 (RECA) - HMPREF9088_0758 Tetragenococcus halophilus NBRC 12172 (RECA) - TEH_00360 97 Enterococcus casseliflavus EC20 (RECA) - ECBG_01188 Enterococcus gallinarum EG2 (RECA) - EGBG_02836 Enterococcus faecium C68 (RECA) - EFXG_01326 97 Lactobacillus coryniformis subsp. coryniformis KCTC 3167 (LCORCK3_010100000335) - LcorcK3_010100000335 29 17 83 77 Lactobacillus rhamnosus GG (2 inparalogs) LRHM_0846,LGG_00889 Lactobacillus casei BL23 (LCABL_10360) - LCABL_10360 Lactobacillus farciminis KCTC 3681 (RECA) - LfarK3_010100010374 Lactobacillus sakei subsp. sakei 23K (RECA) - LSA0487 96 79 Lactobacillus ruminis SPM0211 (RECA) - LRU_00054 81 Lactobacillus salivarius UCC118 (RECA) - LSL_1130 Lactobacillus animalis KCTC 3501 (RECA) - LaniK3_010100005927 55 83 99 Pediococcus claussenii ATCC BAA-344 (RECA) - PECL_710 98 Pediococcus acidilactici DSM 20284 (RECA) - HMPREF0623_0717 Pediococcus pentosaceus ATCC 25745 (RECA) - PEPE_1276 80 Lactobacillus plantarum WCFS1 (RECA) - lp_2301 Lactobacillus coleohominis 101-4-CHN (RECA) - HMPREF0501_01012 99 Lactobacillus vaginalis ATCC 49540 (RECA) - HMPREF0549_0867 87 Lactobacillus reuteri 100-23 (RECA) - Lreu23DRAFT_3582 Lactobacillus antri DSM 16041 (RECA) - HMPREF0494_1149 Lactobacillus oris F0423 (RECA) - HMPREF9102_0045 3 Lactobacillus brevis ATCC 367 (RECA) - LVIS_1237 Lactobacillus buchneri NRRL B-30929 (RECA) - Lbuc_0912 Lactobacillus buchneri ATCC 11577 (HMPREF0497_2234) - HMPREF0497_2234 Lactobacillus iners AB-1 (RECA) - LineA_010100000680 15 99 Lactobacillus johnsonii NCC 533 (RECA) - LJ0839 Lactobacillus gasseri ATCC 33323 (RECA) - LGAS_1338 52 99 Lactobacillus jensenii 1153 (RECA) - LBJG_01176 Lactobacillus jensenii 27-2-CHN (RECA) - HMPREF0525_00662 76 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 (RECA) - Ldb0599 66 Lactobacillus amylolyticus DSM 11664 (RECA) - HMPREF0493_1487 87 58 Lactobacillus acidophilus NCFM (RECA) - LBA0666 Lactobacillus kefiranofaciens ZW3 (RECA) - WANG_0984 85 11 83 Lactobacillus crispatus ST1 (RECA) - LCRIS_00674 Lactobacillus helveticus DPC 4571 (RECA) - lhv_0713 Lactobacillus acidophilus 30SC (RECA) - LAC30SC_03330 Lactobacillus ultunensis DSM 16047 (RECA) - HMPREF0548_0700 Carnobacterium sp. AT7 (CAT7_02372) - CAT7_02372 Carnobacterium sp. 17-4 (RECA) - CAR_c06850 94 Aerococcus viridans ATCC 11563 (RECA) - HMPREF0061_0158 Aerococcus urinae ACS-120-V-Col10a (RECA) - HMPREF9243_1387 52 93 86 59 Bacillus coagulans 36D1 (RECA) - Bcoa_3326 74 Bacillus cytotoxicus NVH 391-98 (RECA) - Bcer98_2431 71 Bacillus pumilus SAFR-032 (RECA) - BPUM_1598 19 99 Bacillus amyloliquefaciens FZB42 (RECA) - RBAM_016780 Bacillus atrophaeus 1942 (RECA) - BATR1942_06270 Bacillus licheniformis DSM 13 = ATCC 14580 (2 inparalogs) RECA,BL05164 40 94 Bacillus coahuilensis m4-4 (RECA) - Bcoam_010100009310 94 Bacillus sp. 2_A_57_CT2 (RECA) - HMPREF1013_00246 Bacillus sp. NRRL B-14911 (RECA) - B14911_02489 89 Bacillus sp. m3-13 (BM3-1_010100005831) - Bm3-1_010100005831 Bacillus megaterium QM B1551 (RECA) - BMQ_4119 67 97 Planococcus donghaensis MPA1U2 (RECA) - GPDM_09715 55 Sporosarcina newyorkensis 2681 (RECA) - HMPREF9372_0572 99 Lysinibacillus fusiformis ZC1 (RECA) - BFZC1_01707 71 Bacillus sp. B14905 (RECA) - BB14905_03065 Lysinibacillus sphaericus C3-41 (RECA) - Bsph_1629 95 76 94 Bacillus cellulosilyticus DSM 2522 (RECA) - Bcell_2429 87 92 Bacillus halodurans C-125 (RECA) - BH2383 Bacillus pseudofirmus OF4 (RECA) - BpOF4_19580 19 Bacillus clausii KSM-K16 (RECA) - ABC2199 Bacillus selenitireducens MLS10 (RECA) - Bsel_1811 86 99 Exiguobacterium sibiricum 255-15 (RECA) - Exig_1026 Exiguobacterium sp. AT1b (RECA) - EAT1b_0429 96 Oceanobacillus iheyensis HTE831 (RECA) - OB1624 Ornithinibacillus scapharcae TW25 (OTW25_010100000635) - OTW25_010100000635 88 52 94 98 Kyrpidia tusciae DSM 2912 (RECA) - Btus_1604 Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 (RECA) - Aaci_1473 Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 (RECA) - TC41_1413 71 84 Paenibacillus mucilaginosus KNP414 (RECA) - KNP414_05737 75 92 Paenibacillus sp. oral taxon 786 str. D14 (POTG_00362) - POTG_00362 33 99 84 Paenibacillus polymyxa SC2 (RECA) - PPSC2_c2172 Paenibacillus polymyxa M1 (RECA) - PPM_1962 81 Paenibacillus polymyxa E681 (RECA) - PPE_01960 Paenibacillus terrae HPL-003 (RECA) - HPL003_18530 95 Paenibacillus sp. Y412MC10 (RECA) - GYMC10_4108 Paenibacillus vortex V453 (RECA) - PVOR_22299 Paenibacillus sp. HGF7 (RECA) - HMPREF9413_2983 93 73 Paenibacillus sp. JDR-2 (RECA) - Pjdr2_3379 Paenibacillus sp. oral taxon 786 str. D14 (POTG_02783) - POTG_02783 Paenibacillus curdlanolyticus YK9 (RECA) - PaecuDRAFT_0645 98 Brevibacillus brevis NBRC 100599 (RECA) - BBR47_33960 Brevibacillus laterosporus LMG 15441 (RECA) - BRLA_c32880 Caldalkalibacillus thermarum TA2.A1 (RECA) - CathTA2_2570 Anoxybacillus flavithermus WK1 (RECA) - Aflv_1530 64 90 Geobacillus thermoglucosidasius C56-YS93 (RECA) - Geoth_2624 97 Geobacillus kaustophilus HTA426 (RECA) - GK1295 Geobacillus sp. WCH70 (GWCH70_1188) - GWCH70_1188 Geobacillus thermodenitrificans NG80-2 (RECA) - GTNG_1149 Listeria grayi DSM 20601 (RECA) - HMPREF0556_12412 96 79 Listeria welshimeri serovar 6b str. SLCC5334 (RECA) - lwe1414 81 Listeria ivanovii subsp. ivanovii PAM 55 (RECA) - LIV_1349 89 Listeria monocytogenes EGD-e (RECA) - lmo1398 0 Listeria innocua Clip11262 (RECA) - lin1435 Listeria monocytogenes str. Scott A (RECA) - LMOSA_23190 Listeria seeligeri FSL N1-067 (RECA) - NT03LS_1677 99 98 90 Clostridium lentocellum DSM 5427 (RECA) - Clole_2467 Epulopiscium sp. N.t. morphotype B (RECA) - Epulo_010100005753 89 Eubacterium saburreum DSM 3986 (RECA) - HMPREF0381_0123 Lachnospiraceae oral taxon 107 str. F0167 (RECA) - HMPREF0491_01962 89 61 92 64 76 92 80 Bacteroides pectinophilus ATCC 43243 (RECA) - BACPEC_01584 Eubacterium eligens ATCC 27750 (RECA) - EUBELI_01121 Eubacterium cellulosolvens 6 (RECA) - EubceDRAFT_0992 92 Clostridium phytofermentans ISDg (RECA) - Cphy_2439 Marvinbryantia formatexigens DSM 14469 (RECA) - BRYFOR_07015 88 99 Butyrivibrio proteoclasticus B316 (RECA) - bpr_I1639 Lachnospiraceae bacterium 3_1_57FAA_CT1 (HMPREF0994_03090) - HMPREF0994_03090 78 98 butyrate-producing bacterium SS3/4 (RECA) - CK3_01850 84 49 99 Clostridiales bacterium 1_7_47FAA (RECA) - CBFG_02104 Clostridium bolteae ATCC BAA-613 (RECA) - CLOBOL_02320 Clostridium saccharolyticum WM1 (RECA) - Closa_0674 95 Clostridium cf. saccharolyticum K10 (RECA) - CLS_04100 Clostridium symbiosum WAL-14163 (RECA) - HMPREF9474_01002 55 Coprococcus eutactus ATCC 27759 (RECA) - COPEUT_00320 Clostridium sp. L2-50 (RECA) - CLOL250_00077 82 97 Roseburia inulinivorans DSM 16841 (RECA) - ROSEINA2194_01218 79 Roseburia intestinalis XB6B4 (RECA) - RO1_12150 Roseburia hominis A2-183 (RECA) - RHOM_08945 21 Eubacterium rectale DSM 17629 (RECA) - EUR_17970 Eubacterium ventriosum ATCC 27560 (RECA) - EUBVEN_01326 93 59 Blautia hansenii DSM 20583 (RECA) - BLAHAN_05202 97 Blautia hydrogenotrophica DSM 10507 (RECA) - RUMHYD_01706 88 Ruminococcus sp. 5_1_39BFAA (RECA) - RSAG_00748 93 Ruminococcus sp. SR1/5 (RECA) - CK1_33750 Ruminococcus obeum ATCC 29174 (RECA) - RUMOBE_00845 Ruminococcus obeum A2-162 (RECA) - CK5_06950 41 87 245018 (RECA) - CL2_00460 Anaerostipes caccae DSM 14662 (RECA) - ANACAC_03658 80 Coprococcus catus GD/7 (RECA) - CC1_16820 99 Lachnospiraceae bacterium 9_1_43BFAA (RECA) - HMPREF0987_00420 85 Coprococcus comes ATCC 27758 (RECA) - COPCOM_00388 74 48 93 Ruminococcus torques ATCC 27756 (RECA) - RUMTOR_00728 54 53 87 Clostridium sp. D5 (RECA) - HMPREF0240_04027 Lachnospiraceae bacterium 1_4_56FAA (RECA) - HMPREF0988_02375 Ruminococcus gnavus ATCC 29149 (RECA) - RUMGNA_01745 95 Ruminococcus torques L2-14 (RECA) - RTO_17330 Ruminococcus lactaris ATCC 29176 (RECA) - RUMLAC_01907 Lachnospiraceae bacterium 2_1_46FAA (RECA) - HMPREF9477_00512 91 30 85 Clostridium hylemonae DSM 15053 (RECA) - CLOHYLEM_06771 Clostridium scindens ATCC 35704 (RECA) - CLOSCI_01391 Dorea longicatena DSM 13814 (RECA) - DORLON_02453 Dorea formicigenerans ATCC 27755 (RECA) - DORFOR_01417 80 Butyrivibrio crossotus DSM 2876 (RECA) - BUTYVIB_00185 Clostridium sp. SY8519 (RECA) - CXIVA_24520 79 56 Butyrivibrio fibrisolvens 16/4 (RECA) - CIY_15950 Shuttleworthia satelles DSM 14600 (RECA) - GCWU000342_00527 Abiotrophia defectiva ATCC 49176 (GCWU000182_00049) - GCWU000182_00049 1 Eubacterium hallii DSM 3353 (RECA) - EUBHAL_01260 55 Oribacterium sp. oral taxon 078 str. F0262 (RECA) - GCWU000341_00171 99 Oribacterium sinus F0268 (RECA) - HMPREF6123_1913 Oribacterium sp. oral taxon 108 str. F0425 (RECA) - HMPREF9124_2313 Lachnospiraceae bacterium 3_1_57FAA_CT1 (HMPREF0994_03696) - HMPREF0994_03696 39 88 62 76 99 Alkaliphilus metalliredigens QYMF (RECA) - Amet_2658 Alkaliphilus oremlandii OhILAs (RECA) - Clos_1542