Generated with ETE http://etetoolkit.org Generated with ETE http://etetoolkit.org Macrococcus caseolyticus JCSC5402 (POTC) - MCCL_0717 Staphylococcus pseudintermedius ED99 (POTC) - SPSE_1690 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 (SSP1688) - SSP1688 96 Staphylococcus carnosus subsp. carnosus TM300 (POTC) - Sca_0727 Staphylococcus lugdunensis HKU09-01 (SLGD_01774) - SLGD_01774 97 Staphylococcus hominis subsp. hominis C80 (HMPREF0798_00624) - HMPREF0798_00624 Staphylococcus haemolyticus JCSC1435 (POTC) - SH1851 98 Staphylococcus warneri L37603 (STAWA0001_1016) - STAWA0001_1016 45 Staphylococcus epidermidis M23864:W1 (POTC) - HMPREF0793_1764 Staphylococcus caprae C87 (HMPREF0786_00202) - HMPREF0786_00202 Staphylococcus epidermidis RP62A (POTC) - SERP0688 Staphylococcus epidermidis ATCC 12228 (SE_0799) - SE0799 Staphylococcus aureus subsp. aureus MSHR1132 (CCE58801.1) - SAMSHR1132_09480 Staphylococcus aureus subsp. aureus COL (SACOL1110) - SACOL1110 0 Staphylococcus aureus subsp. aureus Mu50 (POTC) - SAV1101 Staphylococcus aureus subsp. aureus NCTC 8325 (SAOUHSC_01048) - SAOUHSC_01048 98 Gemella morbillorum M424 (HMPREF0432_00156) - HMPREF0432_00156 91 Gemella sanguinis M325 (HMPREF0433_01465) - HMPREF0433_01465 Gemella haemolysans M341 (HMPREF0428_00276) - HMPREF0428_00276 Gemella haemolysans ATCC 10379 (GEMHA0001_0535) - GEMHA0001_0535 99 99 Lactobacillus amylolyticus DSM 11664 (POTC) - HMPREF0493_1019 Lactobacillus crispatus ST1 (POTC) - LCRIS_00719 Lactobacillus helveticus DPC 4571 (LHV_0755) - lhv_0755 97 Lactobacillus ultunensis DSM 16047 (POTC) - HMPREF0548_0743 99 Lactobacillus kefiranofaciens ZW3 (POTC) - WANG_0942 98 Lactobacillus acidophilus NCFM (POTC) - LBA0712 Lactobacillus acidophilus 30SC (LAC30SC_03575) - LAC30SC_03575 64 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 (POTC1) - Ldb0649 Lactobacillus jensenii 27-2-CHN (HMPREF0525_00618) - HMPREF0525_00618 Lactobacillus iners AB-1 (LINEA_010100006099) - LineA_010100006099 Lactobacillus gasseri ATCC 33323 (LGAS_1290) - LGAS_1290 Lactobacillus johnsonii NCC 533 (LJ_0890) - LJ0890 Fructobacillus fructosus KCTC 3544 (FFRUK3_010100002875) - FfruK3_010100002875 86 90 98 Lactobacillus coryniformis subsp. coryniformis KCTC 3167 (LCORCK3_010100001962) - LcorcK3_010100001962 Lactobacillus sakei subsp. sakei 23K (POTC) - LSA1361 99 Weissella koreensis KACC 15510 (WKK_05145) - WKK_05145 99 Weissella paramesenteroides ATCC 33313 (HMPREF0877_0050) - HMPREF0877_0050 Weissella cibaria KACC 11862 (WCIBK1_010100001379) - WcibK1_010100001379 Oenococcus oeni PSU-1 (OEOE_0632) - OEOE_0632 Leuconostoc fallax KCTC 3537 (LFALK3_010100006803) - LfalK3_010100006803 93 Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 (LEUM_0193) - LEUM_0193 94 Leuconostoc argentinum KCTC 3773 (LARGK3_010100000541) - LargK3_010100000541 Leuconostoc kimchii IMSNU 11154 (LKI_06500) - LKI_06500 73 Leuconostoc gelidum KCTC 3527 (LGELK3_010100009598) - LgelK3_010100009598 Leuconostoc gasicomitatum LMG 18811 (POTC) - LEGAS_1733 Leuconostoc citreum KM20 (POTC) - LCK_01598 Lactobacillus reuteri 100-23 (LR0137) - Lreu23DRAFT_4587 98 Lactobacillus vaginalis ATCC 49540 (HMPREF0549_1263) - HMPREF0549_1263 Lactobacillus antri DSM 16041 (POTC) - HMPREF0494_0654 Lactobacillus oris F0423 (HMPREF9102_1691) - HMPREF9102_1691 Lactobacillus buchneri ATCC 11577 (POTC) - HMPREF0497_1741 Lactobacillus buchneri NRRL B-30929 (LBUC_1974) - Lbuc_1974 Lactobacillus casei BL23 (POTC) - LCABL_11730 Lactobacillus rhamnosus GG (2 inparalogs) POTC,LRHM_0928 Lactobacillus brevis ATCC 367 (LVIS_1861) - LVIS_1861 Lactobacillus plantarum WCFS1 (POTC) - lp_0316 Enterococcus casseliflavus EC20 (ECBG_02694) - ECBG_02694 Enterococcus gallinarum EG2 (EGBG_01706) - EGBG_01706 99 Enterococcus faecium C68 (EFXG_01017) - EFXG_01017 95 Enterococcus italicus DSM 15952 (POTC) - HMPREF9088_1729 Enterococcus faecalis V583 (EF_2650) - EF2650 96 Lactobacillus salivarius UCC118 (POTC) - LSL_0115 Lactobacillus animalis KCTC 3501 (LANIK3_010100007744) - LaniK3_010100007744 Lactobacillus ruminis SPM0211 (LRU_01706) - LRU_01706 Lactococcus garvieae Lg2 (LCGL_0871) - LCGL_0871 Lactococcus lactis subsp. cremoris MG1363 (POTC) - llmg_1326 Lactococcus lactis subsp. lactis Il1403 (POTC) - L177493 Streptococcus downei F0415 (HMPREF9176_1553) - HMPREF9176_1553 Streptococcus criceti HS-6 (POTC) - STRCR_1460 98 Streptococcus agalactiae NEM316 (GBS1176) - gbs1176 Streptococcus equinus ATCC 9812 (POTC) - HMPREF0819_0595 99 Streptococcus infantarius subsp. infantarius CJ18 (POTC) - Sinf_1059 Streptococcus macedonicus ACA-DC 198 (POTC) - SMA_1129 96 93 Streptococcus sp. C150 (HMPREF0848_01146) - HMPREF0848_01146 Streptococcus salivarius 57.I (POTC) - Ssal_00529 65 Streptococcus thermophilus LMG 18311 (POTC) - stu1536 Streptococcus vestibularis F0396 (HMPREF9192_0864) - HMPREF9192_0864 94 Streptococcus suis 05ZYH33 (POTC) - SSU05_0807 Streptococcus parasanguinis ATCC 903 (POTC) - HMPREF8577_0779 Streptococcus australis ATCC 700641 (2 inparalogs) POTC,HMPREF9961_1984 98 Streptococcus sp. oral taxon 056 str. F0418 (HMPREF9182_0480) - HMPREF9182_0480 Streptococcus gordonii str. Challis substr. CH1 (POTC) - SGO_0807 82 Streptococcus constellatus subsp. pharyngis SK1060 = CCUG 46377 (HMPREF1042_1137) - HMPREF1042_1137 0 Streptococcus anginosus F0211 (HMPREF0813_00132) - HMPREF0813_00132 Streptococcus anginosus SK52 = DSM 20563 (HMPREF9966_0583) - HMPREF9966_0583 Streptococcus sanguinis SK36 (POTC) - SSA_1050 Streptococcus cristatus ATCC 51100 (2 inparalogs) HMPREF9960_1601,POTC Streptococcus sp. oral taxon 071 str. 73H25AP (POTC) - HMPREF9189_0542 90 Streptococcus sanguinis ATCC 49296 (POTC) - HMPREF8578_1702 0 99 Streptococcus sp. M143 (HMPREF0850_00182) - HMPREF0850_00182 Streptococcus oralis ATCC 35037 (2 inparalogs) POTC,HMPREF8579_1538 0 Streptococcus mitis ATCC 6249 (POTC) - HMPREF8571_1297 0 Streptococcus oralis Uo5 (POTC) - SOR_0741 Streptococcus pneumoniae D39 (POTC) - SPD_1219 0 Streptococcus pneumoniae R6 (POTC) - spr1244 Streptococcus pneumoniae TIGR4 (2 inparalogs) POTC,SP_1387 Streptococcus mitis NCTC 12261 (SM12261_0142) - SM12261_0142 0 Streptococcus mitis SK321 (SMSK321_0813) - SMSK321_0813 0 Streptococcus pseudopneumoniae IS7493 (SPPN_06880) - SPPN_06880 0 Streptococcus sp. M334 (HMPREF0851_00024) - HMPREF0851_00024 0 Streptococcus mitis B6 (POTC) - smi_0745 Streptococcus mitis SK597 (SMSK597_0575) - SMSK597_0575 0 Streptococcus mitis bv. 2 str. SK95 (HMPREF9965_1600) - HMPREF9965_1600 97 Streptococcus mitis bv. 2 str. F0392 (HMPREF9178_0528) - HMPREF9178_0528 Streptococcus infantis SK1302 (SIN_2097) - SIN_2097 97 Streptococcus infantis SK1076 (HMPREF9967_1342) - HMPREF9967_1342 0 Streptococcus infantis SK970 (HMPREF9954_0909) - HMPREF9954_0909 Streptococcus infantis X (HMPREF1124_1125) - HMPREF1124_1125 97 Streptococcus urinalis 2285-97 (STRUR_1057) - STRUR_1057 91 Streptococcus pyogenes M1 GAS (POTC) - SPy_1104 Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957 (SDD27957_04515) - SDD27957_04515 98 Streptococcus equi subsp. zooepidemicus (POTC) - SZO_09090 Streptococcus ictaluri 707-05 (STRIC_1340) - STRIC_1340 Streptococcus parauberis NCFD 2020 (SPB_0462) - SPB_0462 63 Streptococcus uberis 0140J (POTC) - SUB0820 Streptococcus pseudoporcinus SPIN 20026 (HMPREF9320_1608) - HMPREF9320_1608 Streptococcus porcinus str. Jelinkova 176 (STRPO_0470) - STRPO_0470 Streptococcus macacae NCTC 11558 (STRMA_0612) - STRMA_0612 Streptococcus mutans UA159 (POTC) - SMU_975 Eremococcus coleocola ACS-139-V-Col8 (HMPREF9257_1099) - HMPREF9257_1099 Catonella morbi ATCC 51271 (GCWU000282_00478) - GCWU000282_00478 Anaerococcus prevotii DSM 20548 (APRE_1227) - Apre_1227 42 Anaerococcus prevotii ACS-065-V-Col13 (HMPREF9290_0610) - HMPREF9290_0610 Anaerococcus tetradius ATCC 35098 (HMPREF0077_0593) - HMPREF0077_0593 Anaerococcus lactolyticus ATCC 51172 (HMPREF0072_0740) - HMPREF0072_0740 Anaerococcus hydrogenalis DSM 7454 (ANHYDRO_00895) - ANHYDRO_00895 Anaerococcus vaginalis ATCC 51170 (POTC) - HMPREF0078_1354 38 Carnobacterium sp. 17-4 (POTC) - CAR_c18550 Carnobacterium sp. AT7 (CAT7_08705) - CAT7_08705 Granulicatella elegans ATCC 700633 (HMPREF0446_01648) - HMPREF0446_01648 Granulicatella adiacens ATCC 49175 (POTC) - HMPREF0444_1160 Listeria grayi DSM 20601 (POTC) - HMPREF0556_10940 68 Listeria welshimeri serovar 6b str. SLCC5334 (LWE0765) - lwe0765 0 Listeria monocytogenes EGD-e (LMO0809) - lmo0809 0 Listeria monocytogenes str. Scott A (BN418_0942) - LMOSA_16970 Listeria innocua Clip11262 (LIN0799) - lin0799 98 Listeria ivanovii subsp. ivanovii PAM 55 (LIV_0740) - LIV_0740 Listeria seeligeri FSL N1-067 (NT03LS_0964) - NT03LS_0964 99 37 98 Bacillus coagulans 36D1 (BCOA_0956) - Bcoa_0956 Paenibacillus polymyxa E681 (PPE_03299) - PPE_03299 0 Paenibacillus polymyxa SC2 (PPSC2_C3733) - PPSC2_c3733 Paenibacillus terrae HPL-003 (HPL003_26065) - HPL003_26065 98 Paenibacillus mucilaginosus KNP414 (KNP414_07161) - KNP414_07161 Paenibacillus curdlanolyticus YK9 (PAECUDRAFT_1742) - PaecuDRAFT_1742 86 Paenibacillus sp. JDR-2 (PJDR2_0396) - Pjdr2_0396 Bacillus megaterium QM B1551 (POTC) - BMQ_0212 Bacillus coahuilensis m4-4 (BCOAM_010100002185) - Bcoam_010100002185 Sporosarcina newyorkensis 2681 (POTC) - HMPREF9372_0795 Lysinibacillus fusiformis ZC1 (BFZC1_01027) - BFZC1_01027 Bacillus sp. B14905 (BB14905_16585) - BB14905_16585 25 Exiguobacterium sp. AT1b (EAT1B_2407) - EAT1b_2407 Exiguobacterium sibiricum 255-15 (EXIG_2523) - Exig_2523 79 Bacillus sp. NRRL B-14911 (B14911_27540) - B14911_27540 Oceanobacillus iheyensis HTE831 (OB3156) - OB3156 Bacillus sp. m3-13 (BM3-1_010100016809) - Bm3-1_010100016809 96 Geobacillus sp. WCH70 (GWCH70_0325) - GWCH70_0325 Geobacillus thermoglucosidasius C56-YS93 (GEOTH_3528) - Geoth_3528 99 Anoxybacillus flavithermus WK1 (AFLV_2823) - Aflv_2823 Geobacillus kaustophilus HTA426 (GK0725) - GK0725 Geobacillus thermodenitrificans NG80-2 (GTNG_0625) - GTNG_0625 87 Ruminococcus bromii L2-63 (RBR_20530) - RBR_20530 Anaerotruncus colihominis DSM 17241 (ANACOL_02108) - ANACOL_02108 Brachyspira pilosicoli 95/1000 (POTC) - BP951000_1664 98 Brachyspira murdochii DSM 12563 (BMUR_2299) - Bmur_2299 93 Brachyspira hyodysenteriae WA1 (POTC) - BHWA1_02374 Brachyspira intermedia PWS/A (POTC) - Bint_2297 66 Clostridium methylpentosum DSM 5476 (CLOSTMETH_03653) - CLOSTMETH_03653 Subdoligranulum variabile DSM 15176 (SUBVAR_05657) - SUBVAR_05657 Faecalibacterium prausnitzii SL3/3 (FPR_28740) - FPR_28740 93 Faecalibacterium prausnitzii L2-6 (FP2_08070) - FP2_08070 36 Faecalibacterium cf. prausnitzii KLE1255 (HMPREF9436_00115) - HMPREF9436_00115 Faecalibacterium prausnitzii A2-165 (FAEPRAA2165_01630) - FAEPRAA2165_01630 98 Clostridium cellulolyticum H10 (CCEL_0891) - Ccel_0891 Clostridium sp. BNL1100 (CLO1100_3188) - Clo1100_3188 Clostridium papyrosolvens DSM 2782 (CPAP_0525) - Cpap_0525 99 82 Desulfitobacterium hafniense Y51 (DSY1463) - DSY1463 64 Alkaliphilus oremlandii OhILAs (CLOS_2538) - Clos_2538 99 Turicibacter sanguinis PC909 (CUW_2605) - CUW_2605 Peptoniphilus duerdenii ATCC BAA-1640 (POTC) - HMPREF9225_1428 Peptoniphilus harei ACS-146-V-Sch2b (HMPREF9286_0422) - HMPREF9286_0422 Peptoniphilus lacrimalis 315-B (HMPREF0628_0482) - HMPREF0628_0482 99 Peptoniphilus sp. oral taxon 375 str. F0436 (HMPREF9130_1817) - HMPREF9130_1817 99 Parvimonas sp. oral taxon 393 str. F0440 (HMPREF9127_0567) - HMPREF9127_0567 Parvimonas micra ATCC 33270 (PEPMIC_01180) - PEPMIC_01180 Finegoldia magna ATCC 29328 (FMG_0565) - FMG_0565 Finegoldia magna ATCC 53516 (POTC) - HMPREF0391_11301 Acetobacterium woodii DSM 1030 (POTC) - Awo_c14110 Clostridium difficile 630 (POTC) - CD1026 88 Clostridium hiranonis DSM 13275 (CLOHIR_01913) - CLOHIR_01913 Peptostreptococcus stomatis DSM 17678 (HMPREF0634_0468) - HMPREF0634_0468 Peptostreptococcus anaerobius 653-L (HMPREF0631_0994) - HMPREF0631_0994 Clostridium bartlettii DSM 16795 (CLOBAR_01038) - CLOBAR_01038 28 Clostridium perfringens ATCC 13124 (POTC) - CPF_2225 Clostridium perfringens NCTC 8239 (POTC) - AC7_2226 Clostridium acetobutylicum ATCC 824 (POTC) - CA_C0838 Clostridium butyricum E4 str. BoNT E BL5262 (CLP_3016) - CLP_3016 Clostridium botulinum E1 str. BoNT E Beluga (CLO_2853) - CLO_2853 Clostridium botulinum D str. 1873 (CLG_B1811) - CLG_B1811 60 Clostridium novyi NT (POTC) - NT01CX_1228 Clostridium botulinum C str. Eklund (CBC_A1494) - CBC_A1494 Clostridium clariflavum DSM 19732 (CLOCL_1899) - Clocl_1899 Clostridium thermocellum ATCC 27405 (CTHE_0748) - Cthe_0748 89 Clostridium lentocellum DSM 5427 (CLOLE_2933) - Clole_2933 Epulopiscium sp. N.t. morphotype B (EPULO_010100001716) - Epulo_010100001716 99 Parvimonas micra ATCC 33270 (PEPMIC_00068) - PEPMIC_00068 99 Filifactor alocis ATCC 35896 (HMPREF0389_00718) - HMPREF0389_00718 99 Eubacterium yurii subsp. margaretiae ATCC 43715 (POTC) - HMPREF0379_1684 Clostridium sticklandii DSM 519 (CLOST_1746) - CLOST_1746 99 Oscillibacter valericigenes Sjm18-20 (POTC) - OBV_20680 Pseudoflavonifractor capillosus ATCC 29799 (BACCAP_02123) - BACCAP_02123 99 Butyrivibrio fibrisolvens 16/4 (CIY_16650) - CIY_16650 Eubacterium rectale DSM 17629 (EUR_17430) - EUR_17430 99 Roseburia inulinivorans DSM 16841 (ROSEINA2194_02731) - ROSEINA2194_02731 Roseburia intestinalis XB6B4 (RO1_12570) - RO1_12570 24 Eubacterium hallii DSM 3353 (EUBHAL_02396) - EUBHAL_02396 Lachnospiraceae bacterium 1_4_56FAA (HMPREF0988_00340) - HMPREF0988_00340 66 98 Clostridium bolteae ATCC BAA-613 (CLOBOL_01416) - CLOBOL_01416 Clostridiales bacterium 1_7_47FAA (CBFG_04486) - CBFG_04486 75 Clostridium saccharolyticum WM1 (CLOSA_3898) - Closa_3898 butyrate-producing bacterium SS3/4 (CK3_12220) - CK3_12220 99 Clostridium cf. saccharolyticum K10 (CLS_34280) - CLS_34280 Clostridium symbiosum WAL-14163 (HMPREF9474_02448) - HMPREF9474_02448 99 Lachnospiraceae oral taxon 107 str. F0167 (HMPREF0491_01312) - HMPREF0491_01312 Eubacterium saburreum DSM 3986 (POTC2) - HMPREF0381_2433 Oribacterium sp. oral taxon 078 str. F0262 (GCWU000341_02792) - GCWU000341_02792 Oribacterium sp. oral taxon 108 str. F0425 (HMPREF9124_0476) - HMPREF9124_0476 Oribacterium sinus F0268 (HMPREF6123_1191) - HMPREF6123_1191 95 Clostridium phytofermentans ISDg (CPHY_0895) - Cphy_0895 89 Blautia hansenii DSM 20583 (BLAHAN_06657) - BLAHAN_06657 Lachnospiraceae bacterium 2_1_46FAA (HMPREF9477_00329) - HMPREF9477_00329 89 83 Clostridium sp. D5 (HMPREF0240_02841) - HMPREF0240_02841 Ruminococcus gnavus ATCC 29149 (RUMGNA_00599) - RUMGNA_00599 Ruminococcus torques ATCC 27756 (RUMTOR_02437) - RUMTOR_02437 Ruminococcus torques L2-14 (RTO_19980) - RTO_19980 Ruminococcus lactaris ATCC 29176 (RUMLAC_00536) - RUMLAC_00536 Clostridium hylemonae DSM 15053 (CLOHYLEM_06563) - CLOHYLEM_06563 94 Clostridium scindens ATCC 35704 (CLOSCI_00744) - CLOSCI_00744 Dorea formicigenerans ATCC 27755 (DORFOR_00623) - DORFOR_00623 99 Ruminococcus obeum ATCC 29174 (RUMOBE_02643) - RUMOBE_02643 Coprococcus comes ATCC 27758 (COPCOM_02367) - COPCOM_02367 Lachnospiraceae bacterium 9_1_43BFAA (HMPREF0987_01243) - HMPREF0987_01243 Butyrivibrio proteoclasticus B316 (POTC) - bpr_I1328 60 Lachnospiraceae bacterium 3_1_57FAA_CT1 (HMPREF0994_02447) - HMPREF0994_02447 Megasphaera elsdenii DSM 20460 (MELS_1591) - MELS_1591 Mitsuokella multacida DSM 20544 (MITSMUL_03808) - MITSMUL_03808 50 96 Blautia hydrogenotrophica DSM 10507 (RUMHYD_01639) - RUMHYD_01639 Eubacterium cellulosolvens 6 (EUBCEDRAFT_1362) - EubceDRAFT_1362 93 Bacteroides pectinophilus ATCC 43243 (BACPEC_02650) - BACPEC_02650 Clostridium sp. L2-50 (CLOL250_01625) - CLOL250_01625 Coprococcus eutactus ATCC 27759 (COPEUT_00111) - COPEUT_00111 Butyrivibrio crossotus DSM 2876 (BUTYVIB_00847) - BUTYVIB_00847 Acetivibrio cellulolyticus CD2 (ACELC_020100012156) - AcelC_020100012156 245018 (CL2_15550) - CL2_15550 Bacteroides vulgatus ATCC 8482 (BVU_3554) - BVU_3554 Bacteroides fragilis NCTC 9343 (BF2736) - BF2736 99 Bacteroides fragilis 3_1_12 (BFAG_02287) - BFAG_02287 70 Bacteroides thetaiotaomicron VPI-5482 (BT_1289) - BT_1289 Bacteroides caccae ATCC 43185 (BACCAC_00378) - BACCAC_00378 Bacteroides finegoldii DSM 17565 (BACFIN_06456) - BACFIN_06456 Bacteroides xylanisolvens XB1A (BXY_00230) - BXY_00230 Bacteroides coprophilus DSM 18228 (BACCOPRO_02446) - BACCOPRO_02446 Bacteroides coprocola DSM 17136 (BACCOP_03884) - BACCOP_03884 Bacteroides plebeius DSM 17135 (BACPLE_03187) - BACPLE_03187 99 Parabacteroides distasonis ATCC 8503 (BDI_1646) - BDI_1646 Parabacteroides merdae ATCC 43184 (PARMER_02411) - PARMER_02411 98 Bacteroides helcogenes P 36-108 (BACHE_2701) - Bache_2701 Bacteroides fluxus YIT 12057 (HMPREF9446_03100) - HMPREF9446_03100 91 Bacteroides intestinalis DSM 17393 (BACINT_01912) - BACINT_01912 Bacteroides sp. D20 (HMPREF0969_00557) - HMPREF0969_00557 Bacteroides clarus YIT 12056 (HMPREF9445_00214) - HMPREF9445_00214 78 Bacteroides stercoris ATCC 43183 (BACSTE_00825) - BACSTE_00825 Bacteroides eggerthii DSM 20697 (BACEGG_02399) - BACEGG_02399 99 Acholeplasma laidlawii PG-8A (ACL_1285) - ACL_1285 99 Borrelia spielmanii A14S (BSPA14S_0658) - BSPA14S_0658 98 Borrelia afzelii PKo (POTC) - BAPKO_0684 87 Borrelia afzelii PKo (AEL69860.1) - BafPKo_0664 Borrelia garinii PBi (POTC) - BG0663 98 Borrelia valaisiana VS116 (BVAVS116_0658) - BVAVS116_0658 Borrelia bissettii DN127 (BBIDN127_0651) - BbiDN127_0651 Borrelia burgdorferi B31 (BB_0640) - BB_0640 Borrelia duttonii Ly (POTC) - BDU_643 Borrelia turicatae 91E135 (BT0640) - BT0640 Erysipelothrix rhusiopathiae str. Fujisawa (POTC) - ERH_1496 95 99 Holdemania filiformis DSM 12042 (HOLDEFILI_01414) - HOLDEFILI_01414 Bulleidia extructa W1219 (HMPREF9013_0640) - HMPREF9013_0640 Solobacterium moorei F0204 (HMPREF9430_00245) - HMPREF9430_00245 97 Erysipelotrichaceae bacterium 5_2_54FAA (HMPREF0863_01360) - HMPREF0863_01360 Erysipelotrichaceae bacterium 3_1_53 (HMPREF0983_03426) - HMPREF0983_03426 Clostridium sp. HGF2 (HMPREF9406_3835) - HMPREF9406_3835 98 Eubacterium cylindroides T2-87 (EC1_21070) - EC1_21070 Eubacterium dolichum DSM 3991 (EUBDOL_01359) - EUBDOL_01359 87 Eubacterium biforme DSM 3989 (EUBIFOR_01508) - EUBIFOR_01508 Dorea longicatena DSM 13814 (DORLON_02026) - DORLON_02026 Coprobacillus sp. 29_1 (HMPREF9488_02818) - HMPREF9488_02818 Clostridium ramosum DSM 1402 (CLORAM_01425) - CLORAM_01425 Clostridium spiroforme DSM 1552 (CLOSPI_01068) - CLOSPI_01068 Ruminococcus sp. 5_1_39BFAA (RSAG_00343) - RSAG_00343 97 Coprococcus catus GD/7 (CC1_26900) - CC1_26900 Eubacterium ventriosum ATCC 27560 (EUBVEN_01777) - EUBVEN_01777 Acholeplasma laidlawii PG-8A (ACL_0473) - ACL_0473 Candidatus Phytoplasma mali (POTC) - ATP_00292 Candidatus Phytoplasma australiense (POTC) - PAa_0133 Aster yellows witches-broom phytoplasma AYWB (POTC) - AYWB_093 Onion yellows phytoplasma OY-M (POTC) - PAM_661 Mesoplasma florum L1 (MFL509) - Mfl509 41 Mycoplasma putrefaciens KS1 (POTC) - MPUT_0138 Mycoplasma leachii PG50 (MSB_A0242) - MSB_A0242 Mycoplasma mycoides subsp. mycoides SC str. PG1 (POTCD) - MSC_0226 Mycoplasma mobile 163K (POTC) - MMOB0500 99 93 90 Mycoplasma arthritidis 158L3-1 (POTC) - MARTH_orf629 Mycoplasma hominis ATCC 23114 (POTC) - MHO_4470 Mycoplasma bovis PG45 (MBOVPG45_0136) - MBOVPG45_0136 Mycoplasma agalactiae (POTC) - MAGa1330 Mycoplasma columbinum SF7 (MCSF7_00914) - MCSF7_00914 Mycoplasma fermentans PG18 (POTC) - MBIO_0003 Mycoplasma crocodyli MP145 (POTC) - MCRO_0253 Mycoplasma alligatoris A21JP2 (MALL_0234) - MALL_0234 72 Mycoplasma anatis 1340 (GIG_04079) - GIG_04079 Mycoplasma synoviae 53 (POTC) - MS53_0510 Mycoplasma hyorhinis GDL-1 (POTC) - MYM_0492 Mycoplasma hyopneumoniae J (POTC) - MHJ_0542 Mycoplasma conjunctivae HRC/581 (POTC) - MCJ_005850 Mycoplasma pulmonis UAB CTIP (MYPU_4230) - MYPU_4230 52 Mycoplasma penetrans HF-2 (MYPE8590) - MYPE8590 Ureaplasma urealyticum serovar 10 str. ATCC 33699 (UUR10_0119) - UUR10_0119 Ureaplasma parvum serovar 3 str. ATCC 700970 (POTC) - UU109 85 Mycoplasma gallisepticum str. F (POTC) - MGF_2705 Mycoplasma genitalium G37 (POTC) - MgenG_010200001085 Mycoplasma pneumoniae FH (MPNE_0066) - MPNE_0066 Mycoplasma suis KI3806 (POTC) - Msui00650 Mycoplasma haemofelis Ohio2 (POTC) - MHF_1586 Mycoplasma haemocanis str. Illinois (POTC) - MHC_05690 Arcobacter sp. L (ABLL_2201) - ABLL_2201 85 Desulfobacterium autotrophicum HRM2 (POTC2) - HRM2_13760 86 Methylococcus capsulatus str. Bath (POTC) - MCA0870 Marinobacter algicola DG893 (POTC) - MDG893_16407 96 Marinobacter adhaerens HP15 (HP15_4064) - HP15_4064 72 Marinobacter aquaeolei VT8 (MAQU_0343) - Maqu_0343 Marinobacter sp. ELB17 (POTC) - MELB17_22000 99 Psychrobacter cryohalolentis K5 (PCRYO_0237) - Pcryo_0237 Enhydrobacter aerosaccus SK60 (ENHAE0001_2291) - ENHAE0001_2291 97 Psychrobacter sp. PRwf-1 (POTC) - PsycPRwf_1063 Psychrobacter sp. 1501(2011) (POTC) - HMPREF9373_0007 94 Hahella chejuensis KCTC 2396 (HCH_02207) - HCH_02207 Ferrimonas balearica DSM 9799 (FBAL_1194) - Fbal_1194 95 Moritella sp. PE36 (PE36_11347) - PE36_11347 77 Candidatus Riesia pediculicola USDA (RIEPE_0495) - RIEPE_0495 96 Oceanimonas sp. GK1 (POTC) - GU3_10200 Aeromonas veronii B565 (B565_1936) - B565_1936 99 Actinobacillus succinogenes 130Z (ASUC_1744) - Asuc_1744 Mannheimia succiniciproducens MBEL55E (MS0810) - MS0810 99 Haemophilus pittmaniae HK 85 (POTC) - HMPREF9952_1385 98 Aggregatibacter segnis ATCC 33393