Generated with ETE http://etetoolkit.org Generated with ETE http://etetoolkit.org 65 Isosphaera pallida ATCC 43644 (ISOP_1616) - Isop_1616 93 Isosphaera pallida ATCC 43644 (ISOP_2663) - Isop_2663 94 Parabacteroides merdae ATCC 43184 (PARMER_01707) - PARMER_01707 89 79 99 99 Coraliomargarita akajimensis DSM 45221 (CAKA_0543) - Caka_0543 marine gamma proteobacterium HTCC2143 (GP2143_17746) - GP2143_17746 Rhodothermus marinus DSM 4252 (RMAR_1744) - Rmar_1744 86 Lentisphaera araneosa HTCC2155 (LNTAR_05491) - LNTAR_05491 Planctomyces maris DSM 8797 (PM8797T_06040) - PM8797T_06040 Blastopirellula marina DSM 3645 (DSM3645_06454) - DSM3645_06454 Mannheimia haemolytica serotype A2 str. BOVINE (COK_0448) - COK_0448 99 Paenibacillus sp. HGF7 (HMPREF9413_0868) - HMPREF9413_0868 Succinatimonas hippei YIT 12066 (HMPREF9444_00932) - HMPREF9444_00932 Proteus mirabilis HI4320 (PMI2969) - PMI2969 Providencia rettgeri DSM 1131 (PROVRETT_08236) - PROVRETT_08236 95 Rhodopirellula baltica SH 1 (NUPG) - RB12406 Planctomyces brasiliensis DSM 5305 (PLABR_0617) - Plabr_0617 Providencia rettgeri DSM 1131 (PROVRETT_07943) - PROVRETT_07943 99 Serratia proteamaculans 568 (SPRO_4570) - Spro_4570 Serratia odorifera DSM 4582 (PROP4) - HMPREF0758_0988 Mannheimia succiniciproducens MBEL55E (MS1530) - MS1530 Actinobacillus succinogenes 130Z (ASUC_0358) - Asuc_0358 Pectobacterium carotovorum subsp. carotovorum PC1 (PC1_1276) - PC1_1276 89 Pectobacterium wasabiae WPP163 (PECWA_3058) - Pecwa_3058 Pectobacterium atrosepticum SCRI1043 (ECA1400) - ECA1400 Dickeya zeae Ech1591 (DD1591_1196) - Dd1591_1196 Dickeya dadantii 3937 (YEGT) - Dda3937_02812 Pantoea sp. aB (PANABDRAFT_0338) - PanABDRAFT_0338 Enterobacter asburiae LF7a (ENTAS_1036) - Entas_1036 98 Enterobacter sp. 638 (ENT638_1060) - Ent638_1060 Enterobacter cloacae subsp. cloacae NCTC 9394 (ENC_22020) - ENC_22020 88 Enterobacter cloacae subsp. cloacae ATCC 13047 (ECL_03166) - ECL_03166 98 Enterobacter cloacae EcWSU1 (ENC_22020) - EcWSU1_01057 Enterobacter cancerogenus ATCC 35316 (ENTCAN_07542) - ENTCAN_07542 99 Klebsiella oxytoca KCTC 1686 (KOX_13430) - KOX_13430 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (KPN_00538) - KPN_00538 Citrobacter koseri ATCC BAA-895 (CKO_02603) - CKO_02603 Citrobacter sp. 30_2 (CSAG_00351) - CSAG_00351 99 Niastella koreensis GR20-10 (NIAKO_2202) - Niako_2202 Runella slithyformis DSM 19594 (RUNSL_0811) - Runsl_0811 Dyadobacter fermentans DSM 18053 (DFER_2982) - Dfer_2982 Spirosoma linguale DSM 74 (SLIN_0520) - Slin_0520 96 Flavobacterium branchiophilum FL-15 (FBFL15_0125) - FBFL15_0125 63 Cellvibrio japonicus Ueda107 (NUPG) - CJA_3342 Flavobacteria bacterium MS024-2A (FLAV2ADRAFT_0840) - Flav2ADRAFT_0840 97 Robiginitalea biformata HTCC2501 (RB2501_05730) - RB2501_05730 29 Muricauda ruestringensis DSM 13258 (MURRU_1522) - Murru_1522 96 Cellulophaga algicola DSM 14237 (CELAL_1743) - Celal_1743 Gramella forsetii KT0803 (GFO_1025) - GFO_1025 Zunongwangia profunda SM-A87 (ZPR_2440) - ZPR_2440 Maribacter sp. HTCC2170 (FB2170_04965) - FB2170_04965 46 Leeuwenhoekiella blandensis MED217 (MED217_00385) - MED217_00385 96 Krokinobacter sp. 4H-3-7-5 (KRODI_1253) - Krodi_1253 Dokdonia donghaensis MED134 (MED134_09696) - MED134_09696 Polaribacter sp. MED152 (MED152_05175) - MED152_05175 Psychroflexus torquis ATCC 700755 (P700755_09261) - P700755_09261 Leadbetterella byssophila DSM 17132 (LBYS_1016) - Lbys_1016 Sphingobacterium sp. 21 (SPH21_3643) - Sph21_3643 Sphingobacterium sp. 21 (SPH21_2685) - Sph21_2685 Sphingobacterium spiritivorum ATCC 33861 (HMPREF0766_12976) - HMPREF0766_12976 56 Pedobacter saltans DSM 12145 (PEDSA_3793) - Pedsa_3793 99 Pedobacter sp. BAL39 (PBAL39_03874) - PBAL39_03874 Algoriphagus sp. PR1 (ALPR1_18953) - ALPR1_18953 Cyclobacterium marinum DSM 745 (CYCMA_1885) - Cycma_1885 99 Glaciecola sp. 4H-3-7+YE-5 (GLAAG_1603) - Glaag_1603 Pseudoalteromonas atlantica T6c (PATL_2688) - Patl_2688 53 Rheinheimera sp. A13L (RHEIN_0678) - Rhein_0678 99 Alteromonas macleodii str. Deep ecotype (MADE_1002100) - MADE_1002100 Alteromonas sp. SN2 (AMBT_16620) - ambt_16620 Pseudomonas fluorescens F113 (AEV62219.1) - PSF113_2208 Halomonas elongata DSM 2581 (YEGT) - HELO_3206 Chromohalobacter salexigens DSM 3043 (CSAL_0765) - Csal_0765 91 Stenotrophomonas maltophilia K279a (SMLT1195) - Smlt1195 Stenotrophomonas maltophilia R551-3 (SMAL_1048) - Smal_1048 71 Pedobacter heparinus DSM 2366 (PHEP_3651) - Phep_3651 Chitinophaga pinensis DSM 2588 (CPIN_1157) - Cpin_1157 Haliscomenobacter hydrossis DSM 1100 (HALHY_1430) - Halhy_1430 99 Candidatus Solibacter usitatus Ellin6076 (ACID_5055) - Acid_5055 85 Pedosphaera parvula Ellin514 (CFLAV_PD0301) - Cflav_PD0301 Terriglobus saanensis SP1PR4 (ACIPR4_0480) - AciPR4_0480 Granulicella mallensis MP5ACTX8 (ACIX8_1577) - AciX8_1577 87 Gemmatimonas aurantiaca T-27 (GAU_1084) - GAU_1084 Haliscomenobacter hydrossis DSM 1100 (HALHY_3340) - Halhy_3340 Enterobacteriaceae bacterium 9_2_54FAA (HMPREF0864_01042) - HMPREF0864_01042 Serratia odorifera DSM 4582 (HMPREF0758_4149) - HMPREF0758_4149 Pantoea ananatis LMG 20103 (YEGT) - PANA_1533 88 Vibrio sp. N418 (VIBRN418_09603) - VIBRN418_09603 99 Vibrio shilonii AK1 (VSAK1_22564) - VSAK1_22564 Vibrio tubiashii ATCC 19109 (VITU9109_04112) - VITU9109_04112 Providencia rettgeri DSM 1131 (PROVRETT_07301) - PROVRETT_07301 Pectobacterium carotovorum subsp. carotovorum PC1 (PC1_0999) - PC1_0999 Enterobacter cloacae subsp. cloacae ATCC 13047 (ECL_03411) - ECL_03411 99 Enterobacter cancerogenus ATCC 35316 (ENTCAN_06871) - ENTCAN_06871 93 Enterobacter cloacae EcWSU1 (ENC_40630) - EcWSU1_03015 Enterobacter asburiae LF7a (ENTAS_2866) - Entas_2866 Citrobacter rodentium ICC168 (ROD_22231) - ROD_22231 99 Enterobacter cloacae SCF1 (ENC_40630) - Entcl_1600 59 34 Citrobacter koseri ATCC BAA-895 (CKO_00685) - CKO_00685 99 Escherichia coli O157:H7 str. EDL933 (YEGT) - Z3261 67 99 Escherichia coli ATCC 8739 (YEGT) - EcolC_1549 0 Escherichia coli str. K-12 substr. DH10B (YEGT) - ECDH10B_2251 0 Escherichia coli str. K-12 substr. MG1655 (YEGT) - b2098 Escherichia coli str. K-12 substr. W3110 (YEGT) - 1736823 Escherichia coli BL21(DE3) (2 inparalogs) YEGT,B21_01990 0 Escherichia albertii TW07627 (ESCAB7627_2229) - ESCAB7627_2229 0 Escherichia coli CFT073 (YEGT) - c2625 Escherichia coli 536 (YEGT) - ECP_2136 Citrobacter sp. 30_2 (CSAG_01969) - CSAG_01969 99 Citrobacter youngae ATCC 29220 (CIT292_06402) - CIT292_06402 Klebsiella oxytoca KCTC 1686 (KOX_25485) - KOX_25485 Salmonella bongori NCTC 12419 (SBG_1955) - SBG_1955 91 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (YEGT) - STM2142 Salmonella enterica subsp. enterica serovar Typhi str. CT18 (STY2371) - STY2371 Porphyromonas endodontalis ATCC 35406 (NUPG) - POREN0001_0809 70 96 Bacteroides coprocola DSM 17136 (BACCOP_01464) - BACCOP_01464 99 Bacteroides vulgatus ATCC 8482 (BVU_3613) - BVU_3613 Bacteroides stercoris ATCC 43183 (BACSTE_03522) - BACSTE_03522 Bacteroidetes oral taxon 274 str. F0058 (HMPREF0156_01132) - HMPREF0156_01132 Chryseobacterium gleum ATCC 35910 (NUPG) - HMPREF0204_13543 Weeksella virosa DSM 16922 (WEEVI_0640) - Weevi_0640 99 Tannerella forsythia ATCC 43037 (NUPG) - BFO_1819 Capnocytophaga sp. oral taxon 329 str. F0087 (HMPREF9074_06337) - HMPREF9074_06337 Paraprevotella xylaniphila YIT 11841 (HMPREF9442_03277) - HMPREF9442_03277 97 Prevotella amnii CRIS 21A-A (HMPREF9018_2046) - HMPREF9018_2046 Prevotella bivia JCVIHMP010 (HMPREF0648_0973) - HMPREF0648_0973 81 Prevotella multiformis DSM 16608 (NUPG) - HMPREF9141_1909 Prevotella denticola F0289 (NUPG) - HMPREF9137_2205 Prevotella veroralis F0319 (HMPREF0973_00404) - HMPREF0973_00404 Prevotella melaninogenica ATCC 25845 (HMPREF0659_A6636) - HMPREF0659_A6636 99 Prevotella disiens FB035-09AN (NUPG) - HMPREF9296_1791 Prevotella pallens ATCC 700821 (NUPG) - HMPREF9144_1339 Prevotella nigrescens ATCC 33563 (NUPG) - HMPREF9419_0405 Prevotella oris C735 (HMPREF0665_02201) - HMPREF0665_02201 Prevotella salivae DSM 15606 (NUPG) - HMPREF9420_2177 97 Prevotella timonensis CRIS 5C-B1 (HMPREF9019_1775) - HMPREF9019_1775 Prevotella dentalis DSM 3688 (NUPG) - HMPREF9136_0092 Prevotella oralis ATCC 33269 (NUPG) - HMPREF0663_12127 Prevotella marshii DSM 16973 (NUPG) - HMPREF0658_2094 95 Prevotella sp. oral taxon 317 str. F0108 (HMPREF0670_00291) - HMPREF0670_00291 Prevotella buccae D17 (HMPREF0649_00568) - HMPREF0649_00568 90 Prevotella tannerae ATCC 51259 (GCWU000325_00820) - GCWU000325_00820 Prevotella copri DSM 18205 (PREVCOP_04286) - PREVCOP_04286 99 Bacteroides coprosuis DSM 18011 (BCOP_0032) - Bcop_0032 Alistipes putredinis DSM 17216 (ALIPUT_01121) - ALIPUT_01121 Alistipes sp. HGB5 (NUPG) - HMPREF9720_1981 Alistipes shahii WAL 8301 (AL1_26210) - AL1_26210 Porphyromonas uenonis 60-3 (NUPG) - PORUE0001_1394 Porphyromonas gingivalis W83 (NUPG) - PG1836 Porphyromonas gingivalis ATCC 33277 (PGN_1734) - PGN_1734 99 Bacteroides sp. D20 (HMPREF0969_02634) - HMPREF0969_02634 64 Bacteroides fluxus YIT 12057 (HMPREF9446_01684) - HMPREF9446_01684 Bacteroides clarus YIT 12056 (HMPREF9445_02431) - HMPREF9445_02431 Bacteroides eggerthii DSM 20697 (BACEGG_01333) - BACEGG_01333 99 Bacteroides fragilis 3_1_12 (BFAG_00358) - BFAG_00358 Bacteroides fragilis NCTC 9343 (BF0944) - BF0944 Bacteroides caccae ATCC 43185 (BACCAC_01930) - BACCAC_01930 96 Bacteroides intestinalis DSM 17393 (BACINT_04186) - BACINT_04186 Bacteroides thetaiotaomicron VPI-5482 (BT_4330) - BT_4330 99 Bacteroides finegoldii DSM 17565 (BACFIN_08611) - BACFIN_08611 Bacteroides xylanisolvens XB1A (BXY_34430) - BXY_34430 Bacteroides ovatus ATCC 8483 (BACOVA_05132) - BACOVA_05132 37 Dysgonomonas gadei ATCC BAA-286 (HMPREF9455_04001) - HMPREF9455_04001 93 Niastella koreensis GR20-10 (NIAKO_1022) - Niako_1022 Elusimicrobium minutum Pei191 (EMIN_0135) - Emin_0135 99 Flavobacteria bacterium BAL38 (FBBAL38_03680) - FBBAL38_03680 Flavobacterium johnsoniae UW101 (FJOH_2757) - Fjoh_2757 Sphingobacterium spiritivorum ATCC 33861 (NUPG) - HMPREF0766_14412 Sphingobacterium sp. 21 (SPH21_3058) - Sph21_3058 Flavobacterium columnare ATCC 49512 (FCOL_00320) - FCOL_00320 Flavobacterium psychrophilum JIP02/86 (NUPG) - FP1711 Flavobacteriaceae bacterium 3519-10 (FIC_00964) - FIC_00964 Paludibacter propionicigenes WB4 (PALPR_0824) - Palpr_0824 Mycobacterium abscessus ATCC 19977 (MAB_4590) - MAB_4590 Mucilaginibacter paludis DSM 18603 (MUCPA_5127) - Mucpa_5127 Pedobacter sp. BAL39 (PBAL39_01612) - PBAL39_01612 Pedobacter heparinus DSM 2366 (PHEP_2054) - Phep_2054 Proteus mirabilis HI4320 (XAPB) - PMI1570 Providencia rettgeri DSM 1131 (PROVRETT_05713) - PROVRETT_05713 Providencia stuartii ATCC 25827 (PROSTU_03982) - PROSTU_03982 99 Serratia proteamaculans 568 (SPRO_4254) - Spro_4254 Providencia rettgeri DSM 1131 (PROVRETT_09939) - PROVRETT_09939 Providencia alcalifaciens DSM 30120 (PROVALCAL_03684) - PROVALCAL_03684 Enterobacter sp. 638 (ENT638_2933) - Ent638_2933 94 Enterobacter asburiae LF7a (ENTAS_3139) - Entas_3139 Enterobacter cloacae EcWSU1 (XAPB) - EcWSU1_03240 Salmonella enterica subsp. enterica serovar Typhi str. CT18 (XAPB) - STY2657 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (XAPB) - STM2421 Citrobacter sp. 30_2 (CSAG_02209) - CSAG_02209 32 Citrobacter youngae ATCC 29220 (CIT292_06103) - CIT292_06103 Klebsiella oxytoca KCTC 1686 (KOX_26795) - KOX_26795 43 Escherichia albertii TW07627 (ESCAB7627_1464) - ESCAB7627_1464 Escherichia coli str. K-12 substr. W3110 (XAPB) - 1799816 0 Escherichia coli str. K-12 substr. MG1655 (XAPB) - b2406 Escherichia coli str. K-12 substr. DH10B (XAPB) - ECDH10B_2570 99 Escherichia coli CFT073 (XAPB) - c2939 Escherichia coli 536 (XAPB) - ECP_2429 Edwardsiella ictaluri 93-146 (NT01EI_3397) - NT01EI_3397 Edwardsiella tarda EIB202 (NUPG) - ETAE_2985 Salmonella enterica subsp. arizonae serovar str. RSK2980 (SARI_04533) - SARI_04533 66 Salmonella bongori NCTC 12419 (NUPG) - SBG_2712 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (NUPG) - STM3113 Salmonella enterica subsp. enterica serovar Typhi str. CT18 (NUPG) - STY3268 41 Klebsiella oxytoca KCTC 1686 (KOX_02770) - KOX_02770 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (NUPG) - KPN_03396 Enterobacter aerogenes KCTC 2190 (EAE_03210) - EAE_03210 96 Citrobacter koseri ATCC BAA-895 (CKO_04339) - CKO_04339 Citrobacter rodentium ICC168 (NUPG) - ROD_50231 Citrobacter youngae ATCC 29220 (CIT292_09591) - CIT292_09591 Enterobacter cloacae SCF1 (ENC_32140) - Entcl_0791 Enterobacter sp. 638 (ENT638_3369) - Ent638_3369 Enterobacter cancerogenus ATCC 35316 (ENTCAN_08934) - ENTCAN_08934 Enterobacter asburiae LF7a (ENTAS_3634) - Entas_3634 99 Enterobacter cloacae subsp. cloacae NCTC 9394 (ENC_32140) - ENC_32140 94 Enterobacter cloacae subsp. cloacae ATCC 13047 (ECL_04292) - ECL_04292 Enterobacter cloacae EcWSU1 (NUPG) - EcWSU1_03763 Escherichia albertii TW07627 (ESCAB7627_0863) - ESCAB7627_0863 99 Escherichia coli ATCC 8739 (NUPG) - EcolC_0750 0 Escherichia coli str. K-12 substr. MG1655 (NUPG) - b2964 0 Escherichia coli str. K-12 substr. W3110 (NUPG) - 85675774 0 Escherichia coli BL21(DE3) (NUPG) - ECD_02794 0 Escherichia coli BL21(DE3) (B21_02757) - B21_02757 0 Escherichia coli O157:H7 str. EDL933 (NUPG) - Z4309 0 Shigella flexneri 2a str. 301 (NUPG) - SF2961 Escherichia coli CFT073 (NUPG) - c3552 Escherichia coli 536 (NUPG) - ECP_2958 44 Spirochaeta smaragdinae DSM 11293 (SPIRS_0493) - Spirs_0493 Clostridium sp. BNL1100 (CLO1100_2614) - Clo1100_2614 49 Planctomyces maris DSM 8797 (PM8797T_26345) - PM8797T_26345 Planctomyces limnophilus DSM 3776 (PLIM_2951) - Plim_2951 Pirellula staleyi DSM 6068 (PSTA_1732) - Psta_1732 97 Verrucomicrobium spinosum DSM 4136 (VSPID_010100012695) - VspiD_010100012695 Chthoniobacter flavus Ellin428 (CFE428DRAFT_2266) - CfE428DRAFT_2266 Novosphingobium aromaticivorans DSM 12444 (SARO_3166) - Saro_3166 Sphingobium chlorophenolicum L-1 (SPHCH_3339) - Sphch_3339 77 Phenylobacterium zucineum HLK1 (PHZ_C2157) - PHZ_c2157 Caulobacter segnis ATCC 21756 (CSEG_2113) - Cseg_2113 78 Caulobacter crescentus CB15 (CC_1628) - CC_1628 Caulobacter sp. K31 (CAUL_4612) - Caul_4612 Spirochaeta thermophila DSM 6192 (STHERM_C02230) - STHERM_c02230 1.62