Generated with ETE http://etetoolkit.org Generated with ETE http://etetoolkit.org 97 Clostridiales bacterium 1_7_47FAA (CBFG_04868) - CBFG_04868 Anaerococcus lactolyticus ATCC 51172 (HMPREF0072_1603) - HMPREF0072_1603 85 Enterococcus gallinarum EG2 (EGBG_00074) - EGBG_00074 Clostridium beijerinckii NCIMB 8052 (CBEI_0965) - Cbei_0965 Clostridium difficile 630 (CD3277) - CD3277 97 Blautia hydrogenotrophica DSM 10507 (RUMHYD_03004) - RUMHYD_03004 Ruminococcus gnavus ATCC 29149 (RUMGNA_01535) - RUMGNA_01535 Ruminococcus torques L2-14 (RTO_14350) - RTO_14350 57 Anaerofustis stercorihominis DSM 17244 (ANASTE_02168) - ANASTE_02168 Holdemania filiformis DSM 12042 (HOLDEFILI_02287) - HOLDEFILI_02287 Erysipelotrichaceae bacterium 3_1_53 (HMPREF0983_03938) - HMPREF0983_03938 31 Clostridiales bacterium 1_7_47FAA (CBFG_04309) - CBFG_04309 Enterococcus faecium C68 (EFXG_02484) - EFXG_02484 96 Clostridium saccharolyticum WM1 (CLOSA_4272) - Closa_4272 Collinsella intestinalis DSM 13280 (COLINT_03239) - COLINT_03239 Ruminococcus torques L2-14 (RTO_13770) - RTO_13770 Clostridium bolteae ATCC BAA-613 (CLOBOL_05819) - CLOBOL_05819 Clostridiales bacterium 1_7_47FAA (CBFG_04852) - CBFG_04852 Ruminococcus lactaris ATCC 29176 (RUMLAC_00705) - RUMLAC_00705 94 Ruminococcus gnavus ATCC 29149 (RUMGNA_02800) - RUMGNA_02800 Erysipelotrichaceae bacterium 3_1_53 (HMPREF0983_03628) - HMPREF0983_03628 97 Clostridium saccharolyticum WM1 (CLOSA_4181) - Closa_4181 98 Collinsella aerofaciens ATCC 25986 (COLAER_01199) - COLAER_01199 99 Enterococcus faecium C68 (EFXG_02473) - EFXG_02473 Tetragenococcus halophilus NBRC 12172 (TEH_20750) - TEH_20750 98 Faecalibacterium prausnitzii L2-6 (FP2_19670) - FP2_19670 Clostridium beijerinckii NCIMB 8052 (CBEI_4558) - Cbei_4558 99 Lactobacillus farciminis KCTC 3681 (LFARK3_010100000820) - LfarK3_010100000820 Pediococcus pentosaceus ATCC 25745 (PEPE_0197) - PEPE_0197 Pediococcus acidilactici DSM 20284 (LEVF) - HMPREF0623_1483 Clostridium saccharolyticum WM1 (CLOSA_0204) - Closa_0204 98 Thermoanaerobacterium thermosaccharolyticum DSM 571 (TTHE_1830) - Tthe_1830 98 Paenibacillus polymyxa E681 (PPE_01465) - PPE_01465 Paenibacillus polymyxa SC2 (PPSC2_C0477) - PPSC2_c0477 Leptotrichia buccalis C-1013-b (LEBU_2294) - Lebu_2294 Leptotrichia hofstadii F0254 (GCWU000323_02062) - GCWU000323_02062 Cardiobacterium hominis ATCC 15826 (MANY2) - HMPREF0198_1050 93 Haemophilus haemolyticus M21621 (GGC_1666) - GGC_1666 Mannheimia succiniciproducens MBEL55E (MS2378) - MS2378 94 Aggregatibacter aphrophilus NJ8700 (NT05HA_1668) - NT05HA_1668 Aggregatibacter actinomycetemcomitans D7S-1 (D7S_01754) - D7S_1794 Haemophilus pittmaniae HK 85 (MANY) - HMPREF9952_2432 Haemophilus parainfluenzae T3T1 (PARA_03600) - PARA_03600 Actinobacillus succinogenes 130Z (ASUC_0287) - Asuc_0287 Actinobacillus ureae ATCC 25976 (MANY) - HMPREF0027_0060 0 Actinobacillus pleuropneumoniae serovar 1 str. 4074 (APPSER1_17820) - appser1_17820 99 Actinobacillus pleuropneumoniae serovar 5b str. L20 (APL_1661) - APL_1661 Actinobacillus pleuropneumoniae serovar 1 str. 4074 (APLE02000917) - Aple02000917 88 Actinobacillus minor NM305 (AM305_08339) - AM305_08339 Actinobacillus minor 202 (AM202_0200) - AM202_0200 Centipeda periodontii DSM 2778 (MANY) - HMPREF9081_2520 Clostridium beijerinckii NCIMB 8052 (2 inparalogs) CBEI_4912,CBEI_3872 Shewanella putrefaciens CN-32 (SPUTCN32_0212) - Sputcn32_0212 97 Klebsiella oxytoca KCTC 1686 (KOX_13540) - KOX_13540 Bacillus licheniformis DSM 13 = ATCC 14580 (2 inparalogs) LEVF,BL03122 91 Bacillus subtilis subsp. subtilis str. 168 (LEVF) - Bsubs1_010100014786 Bacillus megaterium QM B1551 (LEVF) - BMQ_1590 96 99 Mitsuokella multacida DSM 20544 (MITSMUL_04482) - MITSMUL_04482 Acetonema longum DSM 6540 (ALO_00065) - ALO_00065 98 Clostridium botulinum BKT015925 (CBC4_0782) - CbC4_0782 Lactobacillus casei BL23 (SORC) - LCABL_04270 Sebaldella termitidis ATCC 33386 (STERM_1994) - Sterm_1994 Yersinia enterocolitica subsp. enterocolitica 8081 (SORA) - YE0812 Klebsiella oxytoca KCTC 1686 (KOX_08105) - KOX_08105 77 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (SORA) - KPN_04404 99 Citrobacter sp. 30_2 (CSAG_04379) - CSAG_04379 Escherichia coli CFT073 (C4983) - c4983 99 Shigella flexneri 2a str. 301 (SORA) - SF4090 Escherichia coli O157:H7 str. EDL933 (ECS5000) - Z5615 99 Selenomonas noxia ATCC 43541 (MANY) - HMPREF7545_1486 Anaerostipes caccae DSM 14662 (ANACAC_03738) - ANACAC_03738 245018 (CL2_07360) - CL2_07360 Listeria welshimeri serovar 6b str. SLCC5334 (LWE0741) - lwe0741 89 Listeria monocytogenes EGD-e (LMO0782) - lmo0782 Listeria innocua Clip11262 (LIN0775) - lin0775 0 Listeria monocytogenes str. Scott A (BN418_0903) - LMOSA_16680 Listeria seeligeri FSL N1-067 (NT03LS_0939) - NT03LS_0939 Listeria ivanovii subsp. ivanovii PAM 55 (LIV_0716) - LIV_0716 Cardiobacterium hominis ATCC 15826 (MANY) - HMPREF0198_1008 96 Aggregatibacter actinomycetemcomitans D7S-1 (D7S_01287) - D7S_1317 Haemophilus ducreyi 35000HP (MANY) - HD0767 96 Actinobacillus succinogenes 130Z (ASUC_0937) - Asuc_0937 98 Mannheimia succiniciproducens MBEL55E (MS0617) - MS0617 Actinobacillus pleuropneumoniae serovar 1 str. 4074 (APLE02002046) - Aple02002046 0 Actinobacillus pleuropneumoniae serovar 5b str. L20 (PTNC) - APL_1392 Actinobacillus pleuropneumoniae serovar 1 str. 4074 (APPSER1_15170) - appser1_15170 69 Mannheimia haemolytica serotype A2 str. BOVINE (COK_1899) - COK_1899 Pasteurella dagmatis ATCC 43325 (MANY) - HMPREF0621_1717 Pasteurella multocida subsp. multocida str. Pm70 (PTNC) - PM0833 Actinobacillus minor 202 (AM202_03655) - AM202_03655 97 Haemophilus parasuis SH0165 (MANY) - HAPS_1731 Actinobacillus minor NM305 (AM305_00459) - AM305_00459 99 Gallibacterium anatis UMN179 (UMN179_00757) - UMN179_00757 Haemophilus somnus 129PT (MANY) - HS_0608 95 Baumannia cicadellinicola str. Hc (Homalodisca coagulata) (BCI_0450) - BCI_0450 Candidatus Blochmannia pennsylvanicus str. BPEN (MANY) - BPEN_460 Candidatus Blochmannia floridanus (MANY) - Bfl446 Candidatus Blochmannia vafer str. BVAF (MANY) - BVAF_447 97 Rahnella sp. Y9602 (RAHAQ_2899) - Rahaq_2899 Rahnella aquatilis CIP 78.65 = ATCC 33071 (AEX52749.1) - Rahaq2_2923 97 Erwinia billingiae Eb661 (MANY) - EbC_24590 71 Plautia stali symbiont (PSTAS_010100006491) - Pstas_010100006491 Pantoea sp. At-9b (PAT9B_2237) - Pat9b_2237 89 Escherichia albertii TW07627 (MANY) - ESCAB7627_1986 99 Escherichia coli str. K-12 substr. W3110 (MANY) - 1736456 0 Escherichia coli CFT073 (MANY) - c2224 0 Escherichia coli O157:H7 str. EDL933 (MANY) - Z2861 0 Escherichia coli ATCC 8739 (MANY) - EcolC_1814 0 Escherichia coli str. K-12 substr. DH10B (MANY) - ECDH10B_1956 0 Shigella flexneri 2a str. 301 (MANY) - SF1410 0 Escherichia coli str. K-12 substr. MG1655 (MANY) - b1818 0 Escherichia coli BL21(DE3) (MANY) - ECD_01788 0 Escherichia coli 536 (MANY) - ECP_1761 Escherichia coli BL21(DE3) (B21_01776) - B21_01776 Cronobacter sakazakii ATCC BAA-894 (ESA_01434) - ESA_01434 99 0 Enterobacter cloacae EcWSU1 (MANY) - EcWSU1_02742 0 99 Enterobacter cancerogenus ATCC 35316 (ENTCAN_06523) - ENTCAN_06523 Enterobacter asburiae LF7a (ENTAS_2525) - Entas_2525 Citrobacter sp. 30_2 (CSAG_01665) - CSAG_01665 0 Citrobacter rodentium ICC168 (MANY) - ROD_18561 Citrobacter youngae ATCC 29220 (CIT292_06761) - CIT292_06761 99 Salmonella enterica subsp. arizonae serovar str. RSK2980 (SARI_01109) - SARI_01109 0 0 Salmonella bongori NCTC 12419 (MANY) - SBG_1687 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (KPN_02334) - KPN_02334 Klebsiella oxytoca KCTC 1686 (KOX_23655) - KOX_23655 Enterobacter aerogenes KCTC 2190 (EAE_22610) - EAE_22610 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (MANY) - STM1831 Salmonella enterica subsp. enterica serovar Typhi str. CT18 (MANY) - STY1960 99 Enterobacter cloacae subsp. cloacae ATCC 13047 (ECL_01486) - ECL_01486 98 Enterobacter sp. 638 (ENT638_2387) - Ent638_2387 0 Citrobacter koseri ATCC BAA-895 (CKO_01160) - CKO_01160 Enterobacter cloacae SCF1 (ENC_06780) - Entcl_1975 98 Pantoea ananatis LMG 20103 (MANY) - PANA_2146 Pantoea sp. aB (PANABDRAFT_1313) - PanABDRAFT_1313 Pantoea vagans C9-1 (MANY) - Pvag_1593 84 99 Dickeya dadantii Ech586 (DD586_1973) - Dd586_1973 Dickeya zeae Ech1591 (DD1591_1982) - Dd1591_1982 86 Dickeya dadantii Ech703 (DD703_2022) - Dd703_2022 Dickeya dadantii 3937 (MANY) - Dda3937_03726 70 Pectobacterium carotovorum subsp. carotovorum PC1 (PC1_1925) - PC1_1925 Pectobacterium atrosepticum SCRI1043 (MANY) - ECA2386 Pectobacterium wasabiae WPP163 (PECWA_2218) - Pecwa_2218 Candidatus Moranella endobia PCIT (MEPCIT_158) - MEPCIT_158 Sodalis glossinidius str. morsitans (SG1326) - SG1326 29 Enterobacteriaceae bacterium 9_2_54FAA (HMPREF0864_01371) - HMPREF0864_01371 99 Edwardsiella tarda EIB202 (MANY) - ETAE_1558 Edwardsiella ictaluri 93-146 (NT01EI_1720) - NT01EI_1720 99 Serratia proteamaculans 568 (SPRO_2814) - Spro_2814 57 Serratia odorifera 4Rx13 (SOD_B04700) - SOD_b04700 Serratia odorifera DSM 4582 (MANY) - HMPREF0758_3324 Yersinia enterocolitica subsp. enterocolitica 8081 (MANY) - YE1776 Yersinia pestis CO92 (MANY) - YPO1757 Yersinia pestis KIM10 (MANY) - y2552 Providencia stuartii ATCC 25827 (PROSTU_02813) - PROSTU_02813 95 Providencia rustigianii DSM 4541 (PROVRUST_07285) - PROVRUST_07285 95 Providencia alcalifaciens DSM 30120 (PROVALCAL_01855) - PROVALCAL_01855 Providencia rettgeri DSM 1131 (PROVRETT_05543) - PROVRETT_05543 Xenorhabdus bovienii SS-2004 (MANY) - XBJ1_2566 Xenorhabdus nematophila ATCC 19061 (MANY) - XNC1_1933 34 Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 (MANY) - PAU_01836 Photorhabdus luminescens subsp. laumondii TTO1 (MANY) - plu2698 98 Candidatus Riesia pediculicola USDA (RIEPE_0101) - RIEPE_0101 Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) (MANY) - HDEF_0158 Rothia mucilaginosa DY-18 (RMDY18_00310) - RMDY18_00310 Rothia dentocariosa ATCC 17931 (MANY) - HMPREF0733_10873 Actinomyces sp. oral taxon 448 str. F0400 (MANY) - HMPREF9062_0644 Actinomyces sp. oral taxon 175 str. F0384 (MANY) - HMPREF9058_0565 Actinomyces sp. oral taxon 170 str. F0386 (HMPREF9056_02461) - HMPREF9056_02461 Lactobacillus brevis ATCC 367 (LVIS_0557) - LVIS_0557 Lactobacillus buchneri ATCC 11577 (HMPREF0497_2864) - HMPREF0497_2864 Lactobacillus buchneri NRRL B-30929 (LBUC_1484) - Lbuc_1484 97 Aerococcus viridans ATCC 11563 (MANY) - HMPREF0061_0013 Leuconostoc fallax KCTC 3537 (LFALK3_010100009479) - LfalK3_010100009479 Weissella paramesenteroides ATCC 33313 (HMPREF0877_1840) - HMPREF0877_1840 Weissella cibaria KACC 11862 (WCIBK1_010100000025) - WcibK1_010100000025 97 Coriobacterium glomerans PW2 (CORGL_0229) - Corgl_0229 Eubacterium biforme DSM 3989 (EUBIFOR_00386) - EUBIFOR_00386 97 Lactococcus garvieae Lg2 (LCGL_0504) - LCGL_0504 Lactococcus lactis subsp. cremoris MG1363 (PTNC) - llmg_0728 Lactococcus lactis subsp. lactis Il1403 (PTNC) - L146623 Granulicatella adiacens ATCC 49175 (MANY) - HMPREF0444_0325 Gemella morbillorum M424 (HMPREF0432_00718) - HMPREF0432_00718 23 Granulicatella elegans ATCC 700633 (HMPREF0446_00411) - HMPREF0446_00411 Gemella sanguinis M325 (HMPREF0433_00253) - HMPREF0433_00253 Gemella haemolysans M341 (HMPREF0428_00773) - HMPREF0428_00773 Gemella haemolysans ATCC 10379 (GEMHA0001_0018) - GEMHA0001_0018 96 Eremococcus coleocola ACS-139-V-Col8 (MANY) - HMPREF9257_0741 97 Catonella morbi ATCC 51271 (GCWU000282_00201) - GCWU000282_00201 88 Leptotrichia goodfellowii F0264 (HMPREF0554_0728) - HMPREF0554_0728 Leptotrichia hofstadii F0254 (GCWU000323_01901) - GCWU000323_01901 Leptotrichia buccalis C-1013-b (LEBU_0456) - Lebu_0456 Streptobacillus moniliformis DSM 12112 (SMON_1300) - Smon_1300 85 Coriobacterium glomerans PW2 (CORGL_1012) - Corgl_1012 97 Coprobacillus sp. 29_1 (HMPREF9488_00374) - HMPREF9488_00374 59 Clostridium ramosum DSM 1402 (CLORAM_00517) - CLORAM_00517 Candidatus Arthromitus sp. SFB-rat-Yit (RATSFB_0276) - RATSFB_0276 Candidatus Arthromitus sp. SFB-mouse-Japan (SFBM_0346) - SFBM_0346 92 Erysipelotrichaceae bacterium 3_1_53 (HMPREF0983_01934) - HMPREF0983_01934 Clostridium sp. HGF2 (MANY) - HMPREF9406_2233 Clostridium hiranonis DSM 13275 (CLOHIR_00016) - CLOHIR_00016 Clostridium spiroforme DSM 1552 (2 inparalogs) CLOSPI_02207,CLOSPI_00335 Anaerococcus hydrogenalis DSM 7454 (ANHYDRO_00270) - ANHYDRO_00270 Anaerococcus vaginalis ATCC 51170 (MANY) - HMPREF0078_1753 Anaerococcus tetradius ATCC 35098 (HMPREF0077_1489) - HMPREF0077_1489 Anaerococcus lactolyticus ATCC 51172 (HMPREF0072_1973) - HMPREF0072_1973 98 Eubacterium biforme DSM 3989 (EUBIFOR_02386) - EUBIFOR_02386 Olsenella uli DSM 7084 (OLSU_1118) - Olsu_1118 Atopobium parvulum DSM 20469 (APAR_0465) - Apar_0465 Atopobium rimae ATCC 49626 (ATORI0001_0208) - ATORI0001_0208 61 Atopobium vaginae PB189-T1-4 (HMPREF9248_1015) - HMPREF9248_1015 Atopobium vaginae DSM 15829 (MANY) - HMPREF0091_10443 Collinsella aerofaciens ATCC 25986 (COLAER_01260) - COLAER_01260 Collinsella intestinalis DSM 13280 (COLINT_03183) - COLINT_03183 Collinsella stercoris DSM 13279 (COLSTE_02358) - COLSTE_02358 97 93 Anaerostipes caccae DSM 14662 (ANACAC_03619) - ANACAC_03619 68 Eubacterium hallii DSM 3353 (EUBHAL_01968) - EUBHAL_01968 245018 (CL2_18010) - CL2_18010 99 Lactobacillus sakei subsp. sakei 23K (MANM) - LSA0450 99 Lactobacillus farciminis KCTC 3681 (LFARK3_010100002882) - LfarK3_010100002882 Lactobacillus casei BL23 (MANM) - LCABL_30330 Lactobacillus rhamnosus GG (2 inparalogs) LGG_02837,LRHM_2727 Lactobacillus coryniformis subsp. coryniformis KCTC 3167 (LCORCK3_010100001182) - LcorcK3_010100001182 Lactobacillus plantarum WCFS1 (PTS9C) - lp_0576 87 Pediococcus pentosaceus ATCC 25745 (PEPE_1517) - PEPE_1517 Pediococcus acidilactici DSM 20284 (MANM) - HMPREF0623_0971 Pediococcus claussenii ATCC BAA-344 (PECL_341) - PECL_341 76 Bacillus coagulans 36D1 (BCOA_0643) - Bcoa_0643 89 Clostridium perfringens ATCC 13124 (CPF_0819) - CPF_0819 Clostridium perfringens NCTC 8239 (AC7_0853) - AC7_0853 Clostridium beijerinckii NCIMB 8052 (CBEI_0712) - Cbei_0712 99 Clostridium botulinum E1 str. BoNT E Beluga (CLO_2397) - CLO_2397 Clostridium butyricum E4 str. BoNT E BL5262 (CLP_0646) - CLP_0646 86 Oceanobacillus iheyensis HTE831 (OB3374) - OB3374 Enterococcus italicus DSM 15952 (MANY) - HMPREF9088_0106 99 Tetragenococcus halophilus NBRC 12172 (MANM) - TEH_07320 94 Enterococcus casseliflavus EC20 (ECBG_00643) - ECBG_00643 99 Carnobacterium sp. AT7 (CAT7_05716) - CAT7_05716 Carnobacterium sp. 17-4 (LEVF1) - CAR_c05070 Enterococcus faecium C68 (EFXG_01084) - EFXG_01084 Enterococcus faecalis V583 (EF_0021) - EF0021 45 Melissococcus plutonius ATCC 35311 (MPTP_0020) - MPTP_0020 Listeria grayi DSM 20601 (MANM) - HMPREF0556_10585 Listeria monocytogenes EGD-e (MPTC) - lmo0097 0 Listeria innocua Clip11262 (LIN0144) - lin0144 0 Listeria ivanovii subsp. ivanovii PAM 55 (LIV_0088) - LIV_0088 Listeria seeligeri FSL N1-067 (NT03LS_0193) - NT03LS_0193 0 Listeria monocytogenes str. Scott A (MPTC) - LMOSA_9960 Listeria welshimeri serovar 6b str. SLCC5334 (LWE0083) - lwe0083 Lactobacillus animalis KCTC 3501 (LANIK3_010100007674) - LaniK3_010100007674 Lactobacillus ruminis SPM0211 (LRU_01727) - LRU_01727 99 99 Oenococcus oeni PSU-1 (OEOE_0465) - OEOE_0465 92 Lactobacillus jensenii 1153 (LBJG_00157) - LBJG_00157 Lactobacillus jensenii 27-2-CHN (HMPREF0525_01465) - HMPREF0525_01465 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 (LDB1800) - Ldb1800 99 Lactobacillus amylolyticus DSM 11664 (MANY) - HMPREF0493_0707 Lactobacillus acidophilus NCFM (MANM) - LBA0455 99 Lactobacillus acidophilus 30SC (LAC30SC_02340) - LAC30SC_02340 Lactobacillus helveticus DPC 4571 (LHV_0481) - lhv_0481 Lactobacillus kefiranofaciens ZW3 (MANY1) - WANG_1201 0 Lactobacillus crispatus ST1 (MANY1) - LCRIS_00458 Lactobacillus ultunensis DSM 16047 (HMPREF0548_0469) - HMPREF0548_0469 97 Lactobacillus salivarius UCC118 (LSL_0087) - LSL_0087 93 Streptococcus mitis SK321 (SMSK321_1233) - SMSK321_1233 Streptococcus sp. C150 (HMPREF0848_01634) - HMPREF0848_01634 23 Lactobacillus iners AB-1 (LINEA_010100003185) - LineA_010100003185 Lactobacillus gasseri ATCC 33323 (LGAS_1794) - LGAS_1794 Lactobacillus johnsonii NCC 533 (LJ_0504) - LJ0504 86 Lactobacillus fermentum CECT 5716 (LC40_0275) - LC40_0275 Lactobacillus salivarius UCC118 (LSL_0655) - LSL_0655 97 Weissella koreensis KACC 15510 (WKK_01830) - WKK_01830 Leuconostoc kimchii IMSNU 11154 (LKI_07335) - LKI_07335 Leuconostoc citreum KM20 (MANM) - LCK_01443 98 Leuconostoc gasicomitatum LMG 18811 (MANM) - LEGAS_0417 Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 (LEUM_1767) - LEUM_1767 Streptococcus macacae NCTC 11558 (STRMA_1337) - STRMA_1337 Streptococcus mutans UA159 (PTNC) - SMU_1878 Streptococcus criceti HS-6 (MANM) - STRCR_0073 96 87 Streptococcus urinalis 2285-97 (STRUR_0337) - STRUR_0337 Streptococcus macedonicus ACA-DC 198 (SMA_0377) - SMA_0377 99 Streptococcus infantarius subsp. infantarius CJ18 (MANM) - Sinf_0329 Streptococcus equinus ATCC 9812 (MANM) - HMPREF0819_1648 Streptococcus anginosus F0211 (HMPREF0813_00926) - HMPREF0813_00926 Streptococcus anginosus SK52 = DSM 20563 (MANY) - HMPREF9966_0141 Streptococcus agalactiae NEM316 (GBS0347) - gbs0347 Streptococcus pyogenes M1 GAS (MANM) - SPy_1739 Streptococcus ictaluri 707-05 (STRIC_0912) - STRIC_0912 Streptococcus equi subsp. zooepidemicus (SZO_15590) - SZO_15590 96 Streptococcus cristatus ATCC 51100 (2 inparalogs) HMPREF9960_0812,MANM 99 Streptococcus oralis Uo5 (MANM) - SOR_0221 75 Streptococcus sp. oral taxon 056 str. F0418 (MANY) - HMPREF9182_0783 Streptococcus gordonii str. Challis substr. CH1 (SGO_1680) - SGO_1680 Streptococcus mitis SK597 (SMSK597_1617) - SMSK597_1617 Streptococcus pneumoniae TIGR4 (SP_0283) - SP_0283 0 Streptococcus pseudopneumoniae IS7493 (SPPN_02155) - SPPN_02155 0 Streptococcus pneumoniae TIGR4 (MANM) - SpneT_02001698 0 Streptococcus pneumoniae R6 (MANM) - spr0260 Streptococcus pneumoniae D39 (MANM) - SPD_0263 Streptococcus sanguinis SK36 (SSA_1919) - SSA_1919 Streptococcus parasanguinis ATCC 903 (MANM) - HMPREF8577_2032 Streptococcus australis ATCC 700641 (2 inparalogs) MANM,HMPREF9961_0478 Streptococcus suis 05ZYH33 (MANM) - SSU05_1779 Streptococcus pseudoporcinus SPIN 20026 (MANY) - HMPREF9320_1914 Streptococcus parauberis NCFD 2020 (MANY) - SPB_1222 Streptococcus porcinus str. Jelinkova 176 (MANY) - STRPO_1042 Streptococcus sp. C150 (HMPREF0848_01630) - HMPREF0848_01630 Streptococcus thermophilus LMG 18311 (MANM) - stu0332 93 Streptococcus mitis NCTC 12261 (SM12261_0588) - SM12261_0588 55 Streptococcus sp. M334 (HMPREF0851_01361) - HMPREF0851_01361 Streptococcus mitis B6 (MANM) - smi_0273 Streptococcus sp. M143 (HMPREF0850_01229) - HMPREF0850_01229 0 Streptococcus sp. oral taxon 071 str. 73H25AP (MANY) - HMPREF9189_0012 Streptococcus mitis bv. 2 str. F0392 (HMPREF9178_1516) - HMPREF9178_1516 Streptococcus mitis bv. 2 str. SK95 (MANY) - HMPREF9965_0064 Streptococcus peroris ATCC 700780 (MANY) - HMPREF9180_1458 Streptococcus infantis SK1302 (SIN_0621) - SIN_0621 84 Streptococcus infantis SK970 (HMPREF9954_1986) - HMPREF9954_1986 Streptococcus infantis X (HMPREF1124_1803) - HMPREF1124_1803 Streptococcus infantis SK1076 (MANY) - HMPREF9967_0183 97 Streptococcus mitis ATCC 6249 (MANY) - HMPREF8571_1744 0 Streptococcus oralis ATCC 35037 (MANY) - SMSK23_0784 0 Streptococcus sanguinis ATCC 49296 (MANY) - HMPREF8578_0205 Streptococcus oralis ATCC 35037 (HMPREF8579_0548) - HMPREF8579_0548 99 98 99 Turicibacter sanguinis PC909 (CUW_1413) - CUW_1413 Granulicatella adiacens ATCC 49175 (AGAC) - HMPREF0444_0889 21 Anaerococcus lactolyticus ATCC 51172 (AGAC) - HMPREF0072_1745 Anaerococcus vaginalis ATCC 51170 (AGAC) - HMPREF0078_1491 Lactococcus garvieae Lg2 (LCGL_1488) - LCGL_1488 85 Enterococcus casseliflavus EC20 (ECBG_01347) - ECBG_01347 97 Atopobium parvulum DSM 20469 (APAR_1065) - Apar_1065 97 Symbiobacterium thermophilum IAM 14863 (AGAC) - STH1248 Atopobium vaginae PB189-T1-4 (HMPREF9248_0837) - HMPREF9248_0837 Atopobium vaginae DSM 15829 (2 inparalogs) AVAGD15_010100000082,AGAC 99 Collinsella intestinalis DSM 13280 (COLINT_03033) - COLINT_03033 Coriobacterium glomerans PW2 (CORGL_0406) - Corgl_0406 Faecalibacterium prausnitzii L2-6 (FP2_30970) - FP2_30970 Clostridium sp. 7_2_43FAA (CSBG_00196) - CSBG_00196 97 Erysipelothrix rhusiopathiae str. Fujisawa (ERH_0283) - ERH_0283 Clostridium spiroforme DSM 1552 (CLOSPI_00166) - CLOSPI_00166 50 97 Clostridium sp. HGF2 (HMPREF9406_2955) - HMPREF9406_2955 Erysipelotrichaceae bacterium 3_1_53 (HMPREF0983_02869) - HMPREF0983_02869 Eubacterium dolichum DSM 3991 (EUBDOL_02281) - EUBDOL_02281 99 Erysipelotrichaceae bacterium 3_1_53 (HMPREF0983_02864) - HMPREF0983_02864 Clostridium sp. HGF2 (HMPREF9406_2960) - HMPREF9406_2960 Ruminococcus torques ATCC 27756 (RUMTOR_00387) - RUMTOR_00387 Bulleidia extructa W1219 (HMPREF9013_1005) - HMPREF9013_1005 84 Solobacterium moorei F0204 (HMPREF9430_00138) - HMPREF9430_00138 Eubacterium biforme DSM 3989 (EUBIFOR_00030) - EUBIFOR_00030 Erysipelotrichaceae bacterium 5_2_54FAA (HMPREF0863_00689) - HMPREF0863_00689 Clostridium bolteae ATCC BAA-613 (CLOBOL_05100) - CLOBOL_05100 Clostridium saccharolyticum WM1 (CLOSA_4033) - Closa_4033 99 Pediococcus acidilactici DSM 20284 (PTS19C) - HMPREF0623_1443 Pediococcus pentosaceus ATCC 25745 (PEPE_0172) - PEPE_0172 Pediococcus acidilactici DSM 20284 (PTSC) - HMPREF0623_0084